Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01515 ATGAATGTTCACAGAAGGGATAGGGCTAGATTGAGATCATCCTTGTCTTCATGGGTTTCTGAATGCCCTAAACCTAACCCTAGCACTAAACCTAATAACCCAACTCTTCTTCCAACATCTTCTTCACCATCTCCTTTATCTGATCAGTCTTTCAACTGTCCACATCCTTCTCCACTTTGCACTCCTTGTCTCACTTTGTCTTCTGCACCACCCTTCCCAGGTTCTACCAGTGGAGACAAGAAACCAAGACTCACACCTTCTCATTCTCACTCTCCTCTTTTGAGTCCTCAAAGCTGCGAAATTAAGATGATGACAAGTAGCAACACAAGGAGTGATGATGAAATGAAGGGCTGTTTGGAGGAGGAGGAGCACAAGGGTTTCAAGGACAATGAGCAAAACATTACTTTGGAATTAGGAATAGGGTTGATTAAACACCAAGAGGAGAAGTTAGACTTGGAGCTTCGACTTGGGCATTTCTAG 480 0.4354 MNVHRRDRARLRSSLSSWVSECPKPNPSTKPNNPTLLPTSSSPSPLSDQSFNCPHPSPLCTPCLTLSSAPPFPGSTSGDKKPRLTPSHSHSPLLSPQSCEIKMMTSSNTRSDDEMKGCLEEEEHKGFKDNEQNITLELGIGLIKHQEEKLDLELRLGHF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01515 159 MobiDBLite consensus disorder prediction 33 51 - -
Vimu3g01515 159 PANTHER OS07G0101800 PROTEIN 1 158 - -
Vimu3g01515 159 MobiDBLite consensus disorder prediction 1 51 - -
Vimu3g01515 159 MobiDBLite consensus disorder prediction 64 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01515 Vimu-Chr3 28581079 28581750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01515 1 157 C2H2 Transcription Factor Family AT3G23130 35.443 6.84e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01515 - - gmx:102660985 179.489