Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01492 ATGCAGATGCTCATAGACAAAGAAATGTCCAAACAGAAAGACTCCAAGCACTACCTACCAAATGTTGTAGCAAAACTAATGGGGCTTGAAACCCTTCCAAGGGGAGAGCCTAATTTATCTATGGAGAGAAGCTACAGAAGTGCTTATCCTCAACAAATGAATGGCCCTGTAGGCTTCCCATTCAGGCATTGGCAGCAGGAAGATAGGTTTATGGACAGGGAAATACTTCATGAAGTTCACCCAAGCACAGAACAGGTTGCTTACAAAGAAATGTATGAAATATGGCAGCAATCTCAGAGAGCAAAGCATGCAAGTGGCAAGGTACCTGATAGAGGAAGATGGAGTGAAGATGTTGATGGTAAAAGAATGGCTCTCATTCGTCAGAAATTCATAGAAGCAAAACATCTGTCAACCGATGAGAGAATGCGTCAATCTAAACAATTTAAAGATGCCTTGGAAGTTCTAAGCTCCAACAGTGATCTCTTAATGAGGTTATTGGATTCTCAAAATGTTTACGAATTTTACTCAAGTCGCCGTACTGATACAAAGCGCATTACTCTTATTAAACCTTTGAAGATGGACGACAATGACAAACCAGCCAGAAAGGAGAAAAGGAACAATAGACTAATTAAGAAATCACCAAATGTTGATCAAGCAGCTGGGTGGGAGAACACGAATTCTGGAAACTCTCCAGATAGTCAGAAAGTTGATGAATCCCCAGTTCGAACCACTCGAATTGTGTTACTGAAACCTAGCCCTGGGAGGACACCTGAGCAAAAGGATGCGGTTTCTCCAACAACAACATCACTACCAAATCTGAGAAGTGGTAATTGCCATCAGGAACCTGAATATGACGATGCAATAGAATCCATTACAGTGGCAAAGGAGATCACACAGCAAATGCATAAGGGTCTGTGGAGCTATCAAAAGGATAAAACTCCACATTGTTCTTCAGTGATTTCCAATGGCTATTCTGATGATGAGAGTTCGTTCAACAAATCATATCACGAGTATGCATCAGCAAATTTCAGTGATTTGGAAGCTATGTCAATGTCACCGCTGCCAAGGCTTTCATGGGATTACAATTACATCAATGGCTGTAGCAGTCCTTATTCTACAATGTCCTTGGGTCGCGTGCCTTGCTCCCCTGAGTCATCAGTGTGCAGAGAGGCGAAGAAAAGGCTTTCTGAAAGATGGACTATGATGGCATCAGATAAGGGTCCTCAAGAACAAACGAAAGTGAGAAGAAACTCTACCTTGGGTGAGATGCTTTCTCTTACCCACATGAAGAAATCTGCAACATCTGTGGTTGAGAGTATTCAAGAGGACCAAGAACCTAGAAAATCTGTTTCTTGCCGTCATTCTTTCAATGCAGAAATAAGCATTGAGGGCTCTCCTAAAAATCTTCCCAGATCAAATTCTGTGCCTGCATCCTCTACTGTCAATGGAACTGAGCTCACAGTTCAAGTTGATGATCCAAAAACTGGCAAATCACAAGCCTCCAGGGCACAGACAAAGTCAAAGAGGAGACCAACGTTTAAAGAAAAAGTAGCCAGTCTCTTGTTCTCAAAGAGTAAGAAATCAACCAAGGAAAAGCCAAGTTCTCCTGAATCTAAGGATGCATCCCAACCCGCTCCTATCGCCACTGAAGCATTAGTTCTTCCAGCATATGCACCTGAAGTCCTTAGGGATGATGAGTCTCAAATCACCAATGTGGATAGTTTTGAAGATTTTTCTCGTGTAGCTCCATGTGAATCATCAGAGAAAACTTCCACAAATTCAGTCGCTAACAGACAAGAAGAAGACATGATTACACTAGAGCCTGGATTGGCAGTGGCAGGGTCCATGATGCTAGAGATTAATTCGAGCGAAAGTCCAGATCAGCCTAGTCCATTCTCAGTGTTACAACCTCCATTTGAAGATGATAAAAATAATGTATCTCATGATATGAAGAATGATCAACTAGGATCACAGGTGGAACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATGATTCTTCTGCAGAAGTGGCAAGCCCCCATCTATTAAAACCTTCCTTGGACTCCAAGATAGAGGAAAAAGAGTGGCTTCTCTTGGTCCACAACCTACTAACAGCAGCTGGACTTGATGACCAGCAGCAATATGACTCGTTTTACACCAGATGGTATTCCCTTGAAAGTCCATTGGACCCAACATTGAGGGACACATTACTCAATGAGAAGGAGCCTCAGCCAATGCACGAGGGAAGAAGAAGGAAGATGAGATCAAATCATAAACTTGTGTTTGATTATATCAATGCTGCACTATTGGAACTTGTTGGTTATGGGTCAGAAAAGTGCTTAAATGGCAGTGGGAACCACTGCAGGGTCCTAATCCAAGAGAGTGCACCGGAATCTACCTTGTTGGTGGACCACATTGTGGCCAAAATAAAGGAATTAATGGCAAGTGGGGTGAGGTGTGAGTGGGACAGCAACAGCCTGGTGGTAGAAAATGTTGTCAGAAAAGAGATTGTGCAGATAGGGTGGGTGGACCTTATGAAATTGGAGATAGACGATTTGGGAAAGGAGATAGAGAGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGGTTGATTTTACAGGTAGGGCCTGA 2667 0.4267 MQMLIDKEMSKQKDSKHYLPNVVAKLMGLETLPRGEPNLSMERSYRSAYPQQMNGPVGFPFRHWQQEDRFMDREILHEVHPSTEQVAYKEMYEIWQQSQRAKHASGKVPDRGRWSEDVDGKRMALIRQKFIEAKHLSTDERMRQSKQFKDALEVLSSNSDLLMRLLDSQNVYEFYSSRRTDTKRITLIKPLKMDDNDKPARKEKRNNRLIKKSPNVDQAAGWENTNSGNSPDSQKVDESPVRTTRIVLLKPSPGRTPEQKDAVSPTTTSLPNLRSGNCHQEPEYDDAIESITVAKEITQQMHKGLWSYQKDKTPHCSSVISNGYSDDESSFNKSYHEYASANFSDLEAMSMSPLPRLSWDYNYINGCSSPYSTMSLGRVPCSPESSVCREAKKRLSERWTMMASDKGPQEQTKVRRNSTLGEMLSLTHMKKSATSVVESIQEDQEPRKSVSCRHSFNAEISIEGSPKNLPRSNSVPASSTVNGTELTVQVDDPKTGKSQASRAQTKSKRRPTFKEKVASLLFSKSKKSTKEKPSSPESKDASQPAPIATEALVLPAYAPEVLRDDESQITNVDSFEDFSRVAPCESSEKTSTNSVANRQEEDMITLEPGLAVAGSMMLEINSSESPDQPSPFSVLQPPFEDDKNNVSHDMKNDQLGSQVELKSNLIDKSPPIESIARTLSWDDSSAEVASPHLLKPSLDSKIEEKEWLLLVHNLLTAAGLDDQQQYDSFYTRWYSLESPLDPTLRDTLLNEKEPQPMHEGRRRKMRSNHKLVFDYINAALLELVGYGSEKCLNGSGNHCRVLIQESAPESTLLVDHIVAKIKELMASGVRCEWDSNSLVVENVVRKEIVQIGWVDLMKLEIDDLGKEIERDLIQELVENAVVDFTGRA 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01492 888 MobiDBLite consensus disorder prediction 461 546 - -
Vimu3g01492 888 MobiDBLite consensus disorder prediction 190 204 - -
Vimu3g01492 888 MobiDBLite consensus disorder prediction 580 601 - -
Vimu3g01492 888 MobiDBLite consensus disorder prediction 584 600 - -
Vimu3g01492 888 MobiDBLite consensus disorder prediction 259 276 - -
Vimu3g01492 888 MobiDBLite consensus disorder prediction 218 237 - -
Vimu3g01492 888 MobiDBLite consensus disorder prediction 461 502 - -
Vimu3g01492 888 Pfam Domain of unknown function (DUF4378) 711 878 IPR025486 -
Vimu3g01492 888 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 887 - -
Vimu3g01492 888 MobiDBLite consensus disorder prediction 190 278 - -
Vimu3g01492 888 Pfam Protein of unknown function (DUF3741) 127 170 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01492 Vimu-Chr3 28185070 28190440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01492 1 885 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.431 2.79e-137 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01492 - - gmx:100787955 1265.75