Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01488 ATGGAAAAGAAGAGAAATTCAGGGTTGGTTTTGGTTTTGGTTTTGGCTTCAGCAAGCCTTTCAAATGCCTCAAGTGTTTTCCCTGGATTCATAAAGTGGCATGTGTACGTTATGAATGAGTTGAACAATGAAAGTTTATTGGTTCATTGCAAATCCAAAGATGATGATTTGGGTAGCCATAAGCTTTTTGAAGGTGGGAATTTCACTTGGAGTTTTAGGACAGATTTCTTACACACCACTCTATTTTGGTGCCATGTGAAAAAGGACAATAACAATAACAACAACGACAATGGTTGTGACAGAACTGCCTCATTTGACGTGTTTTGGTACGATGAACGTCTTTTTCAGAAGTGTCATTGGAAGAATTGCCTTTGGAGAGTTAGGGATGATGGTATTTACCTAACAGCTTTATATCAAACTCAAACTCAGGATTTCTACTATCACTGGGGTGCTACCAGACTTCCCTGA 468 0.3889 MEKKRNSGLVLVLVLASASLSNASSVFPGFIKWHVYVMNELNNESLLVHCKSKDDDLGSHKLFEGGNFTWSFRTDFLHTTLFWCHVKKDNNNNNNDNGCDRTASFDVFWYDERLFQKCHWKNCLWRVRDDGIYLTALYQTQTQDFYYHWGATRLP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01488 155 Pfam Plant self-incompatibility protein S1 34 149 IPR010264 -
Vimu3g01488 155 PANTHER - 31 136 IPR010264 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01488 35 131 Carbohydrate Esterase AT3G16970 28.846 7.29e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01488 - - var:108323364 268.855