Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01487 ATGGGAGAACTGAAGCTACTGGGAGTTTGGCCTAGTTCATTCGTTTACAGGATCATATGGGCGTTAGAACTGAAGGGCATAAAGTATGAGCATGTACAAGGAGAATTCCACAACCCTGATTTCAGTGATTTGCTACTGAAGTATAACCCAGTTTACAAAAAGGTTCCTGTCCTTGTTGTTGATGGAAAGCCAATTGCAGAATCCACTGTCATTCTTGAATACATAGAGGAAACATGGCCACAGCCACCCATGCTTCCAAAGGACCCATATGAGAGGGCCGTGGCACGGTTTTGGATGAGTTTTGCTGAAGAAAAGAGTACTTCGTTTATGTCATTCTTTGTGGCTGTTGGAGAAGAGTTTCAGAAGGCAACAAAGGAAGTAAGAGAAGTGCTTAAAGTATTAGAAGAAACCATTGGGGACAAAAAGTATTTTGGTGGTGAAGAAATTGGAATTTTGGACATAACCTTGGGATGGATACCCTTGTTCTTTGGAGTCATTGAAGATATTGTTGGTGTAAAGGTGTTGGTAGTTGATGATTTTCCCCGCTTGTTTACTTGGATTCGGAACTTCAGTGAGCACCCCTCAATCAGAACGAACTTTCCAAGTCACCATGAGTTATTTGGTTATTACAAGCAAAAGAGAGAGACTATTATTCCACCCAATACAGCATGA 672 0.4137 MGELKLLGVWPSSFVYRIIWALELKGIKYEHVQGEFHNPDFSDLLLKYNPVYKKVPVLVVDGKPIAESTVILEYIEETWPQPPMLPKDPYERAVARFWMSFAEEKSTSFMSFFVAVGEEFQKATKEVREVLKVLEETIGDKKYFGGEEIGILDITLGWIPLFFGVIEDIVGVKVLVVDDFPRLFTWIRNFSEHPSIRTNFPSHHELFGYYKQKRETIIPPNTA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01487 223 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vimu3g01487 223 SFLD Main (cytGST) 2 217 - -
Vimu3g01487 223 CDD GST_N_Tau 4 79 - -
Vimu3g01487 223 Gene3D - 88 219 - -
Vimu3g01487 223 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Vimu3g01487 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 205 IPR045073 -
Vimu3g01487 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Vimu3g01487 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Vimu3g01487 223 Gene3D Glutaredoxin 1 87 - -
Vimu3g01487 223 FunFam Tau class glutathione S-transferase 85 219 - -
Vimu3g01487 223 Pfam Glutathione S-transferase, C-terminal domain 123 188 - -
Vimu3g01487 223 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Vimu3g01487 223 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Vimu3g01487 223 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01487 Vimu-Chr3 28161179 28161939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01487 3 217 Glutathione S-transferase Gene Family AT2G29420 41.204 7.37e-53 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01487 K00799 - gmx:100500361 400.208