Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01438 ATGCGCCATGTTGCTGAAACCCTAAACATCGATTTGGAGGAGCTCTATGTATACATTGGAGCTCTATTGTTTCTTTTGTTTCCAATCCTCGCACGCCTCCGAAAAACGCTTCTATGTTTACGTTCGGGTGATTACGTTGAGTTGCAATTGCAGATGGGTTGCTTCTCCTATTTCGATGAGAGTTCAAGTTCGAGGGAGAATCACGTTCTTTTGTATAATTCTCACCCCACCTTCCTTATCTTTACCTTTTTTTTTCCTTTGAGTAGGTCAGAACGTCCTCGTCTCACATTCTCTACACTCTGTAGCTTCTTTCTGCTTGCATTCTTTGGGAGTTCAGGAACTATAATGGCTTATGTTGGAATAGAACTAAGCTCGCCGACACTTGCATCAGCCCTTATTAACCTCCTCCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGCAATAGTTGCAACAATGATACCTTACCCACTATGCACATGA 495 0.4222 MRHVAETLNIDLEELYVYIGALLFLLFPILARLRKTLLCLRSGDYVELQLQMGCFSYFDESSSSRENHVLLYNSHPTFLIFTFFFPLSRSERPRLTFSTLCSFFLLAFFGSSGTIMAYVGIELSSPTLASALINLLPAFTFILALIFRMEEAIVATMIPYPLCT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01438 164 PANTHER WAT1-RELATED PROTEIN 73 151 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01438 Vimu-Chr3 27220418 27222101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01438 93 151 Nodulin-like Gene Family AT3G28050 55.932 8.82e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01438 - - gmx:100816194 97.4413