Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01371 ATGCATGTTGCAACTAGTAGTAATTTGAAACCGGTTTCACTTAGATTAGGAGGCAAGTCACCTGTCATAATTTTTGATGATGTTGTTGTAAATAAAGCTGCCGAGCTTGCCCTCTTGGGCATCATATTCAACAAGGTTTTTGTGTGCTCGTTCAAGAAGGGATTTATGATGAATTTGAGAAGAAATTGGTGGAGAAAGGAAAAGCCTGGGTGGTTGGTTGACATGAAGCAATTTGAAAAGATCCTTTCTTATATTCATATTGGAAAGAAACAAGGGGCCACCCTTCTGACAGGCGGAAAAAGAGTGGGAAACAAGGGTTACTACATTGAACTTACAGAGGGTACAAAAATGAGTGGATTTAGAAGAGATTTTGGATTGGAAGCTCTACACAAGTATTTACAAGTTAAATCTATTGTAACTCCCATTTACAACTCTCCTTGGCTTTGA 447 0.3848 MHVATSSNLKPVSLRLGGKSPVIIFDDVVVNKAAELALLGIIFNKVFVCSFKKGFMMNLRRNWWRKEKPGWLVDMKQFEKILSYIHIGKKQGATLLTGGKRVGNKGYYIELTEGTKMSGFRRDFGLEALHKYLQVKSIVTPIYNSPWL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01371 148 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 148 IPR016162 GO:0016491
Vimu3g01371 148 SUPERFAMILY ALDH-like 3 144 IPR016161 GO:0016491
Vimu3g01371 148 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 19 115 IPR016163 GO:0016620
Vimu3g01371 148 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 50 - -
Vimu3g01371 148 Pfam Aldehyde dehydrogenase family 5 50 IPR015590 GO:0016491
Vimu3g01371 148 Pfam Aldehyde dehydrogenase family 70 111 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01371 Vimu-Chr3 25617512 25618176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01371 114 148 Aldehyde Dehydrogenase Gene Family AT3G24503 57.143 3.74e-08 49.3