Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01290 ATGTCTAACAATGAACTTGCATCTGGGATGATTTATGTGAAATTCAGGCCTCACCTTCTTATGTTATTCATTCAGATGCTTCTTTCGTTTCTCTATTTCCTTGTAGAGGCTTCATTAAGCAAAGGGATGAACCCTCATGTCTTTGTTACCTATAGGCACGTTATTGGGGGCATAGCTGTGCTTCCTTTTGCTTATGTTCGTGAAAGCTTGAAATATACCACTCCTTCCTTTGATGCATCCATGACTAACACAATCTCATCCCTTACTTTTATAATTGCAGTTGCACTCAGATTAGAGGTTGTTGATGTTAAGAAGCCTCGTGGAGTGGCTAAAGTTTTTGGAACCCTGTTATCTTTGATTGGTGCATTGATAATGACTTTGTATAAAGGGCATACGATACAAAGCTTACGGGGTGCCCCGTTCCATGTCAGAGGAAATTTTGTTCATAATAACTGGATTAAAGGATCACTTTTGTCTGGTGCAAGTTGCATATCATGGTCTTTATGGTTCATACTACAGGCAGTAATAGCGAAGAAATATCAAGCACAACTGTCTCTAACAGTTTGGATAAATTGCATGGGTGCAGCACAGTCTGCCATCTTCGCTGTAATCGTGGAACACAGGCCTAGAGCATGGCTCATTACATCCACTGTGGAACTCTGTTGCGTTTTTTATGCTGGAGCTATATGTGGTGGTTTAGTTATATTCATCCAATTCTGGACTGCAGAACAAAAAGGGCCAGTCTTTGTTAGTATGTTTAATCCCCTTGGAACAATTTTGGTGGCTATCTTAGCATATTTTCTATTTGGTGAACAACTCCACACAGGCAGTTTATTGGGAGTAGTGTTTGTGATAATTGGTCTATACTTGCTGTTATGGGGAAAAGAAAGTGATCGAGATTACAACTCACAGGAATCTTCAGCAACAGATGTTGAGCAGAGAGAATGTAAGACACAAATAAAGATTTCGGCCGAGCAAGAGGTACCGCAGAGAAACGTATCACAGGACACCAATTAA 1017 0.4031 MSNNELASGMIYVKFRPHLLMLFIQMLLSFLYFLVEASLSKGMNPHVFVTYRHVIGGIAVLPFAYVRESLKYTTPSFDASMTNTISSLTFIIAVALRLEVVDVKKPRGVAKVFGTLLSLIGALIMTLYKGHTIQSLRGAPFHVRGNFVHNNWIKGSLLSGASCISWSLWFILQAVIAKKYQAQLSLTVWINCMGAAQSAIFAVIVEHRPRAWLITSTVELCCVFYAGAICGGLVIFIQFWTAEQKGPVFVSMFNPLGTILVAILAYFLFGEQLHTGSLLGVVFVIIGLYLLLWGKESDRDYNSQESSATDVEQRECKTQIKISAEQEVPQRNVSQDTN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01290 338 PANTHER WAT1-RELATED PROTEIN 17 303 IPR030184 GO:0016020|GO:0022857
Vimu3g01290 338 Pfam EamA-like transporter family 155 292 IPR000620 GO:0016020
Vimu3g01290 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 203 296 - -
Vimu3g01290 338 Gene3D - 214 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01290 Vimu-Chr3 22996818 22998674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01290 2 306 Nodulin-like Gene Family AT3G18200 33.923 3.57e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01290 - - gmx:100808275 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01290 3 22996818 22998674 Vimu3g01290 3 22996818 22998674 ECH