Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01284 ATGCTGAAAAAGCTTATGAAATATCAGAACAGTCGTGGTGGAAGAGTTGTTCTTCACCCCATCATGGATGTACCCTTAGAATTTGAGCATGTGGAAAAGAGGGATAAGTTGGTGAATGAGAAACTTCGGAGTGTGCACAATGTGGCAGATCGTAACAATGACCCTCAATTGGCATACTTCATAGAAAGCGAGTTTTTGTCTGAACAAGTTGAAGAAATTAAGAATATATTAGAGTATGTGGCTCAACTTAGGAGGGTTGGAAAGGGTCATGGTGTATGGCACTTTGATTTATGCAACTACACCTACGTCTTCTGCGCTCAAGCACTTAACAACCCTAAGATCCGCACCGTCACCGAAATCGACCTCAACCACAACGACATTGCCGGATATGTCCTCGAGGACCTCAACTTGCTCACTGACCTTGCGTTCCTCCACATCAACACCAACCGCTTCTGCGGCACCATGCCGCACAAGTTCGACAAGCTCAAACTCCTTTTCGAGCTGAATCTCAGCAACAACTGA 522 0.4521 MLKKLMKYQNSRGGRVVLHPIMDVPLEFEHVEKRDKLVNEKLRSVHNVADRNNDPQLAYFIESEFLSEQVEEIKNILEYVAQLRRVGKGHGVWHFDLCNYTYVFCAQALNNPKIRTVTEIDLNHNDIAGYVLEDLNLLTDLAFLHINTNRFCGTMPHKFDKLKLLFELNLSNN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01284 173 SUPERFAMILY L domain-like 93 173 - -
Vimu3g01284 173 Gene3D Ribonuclease Inhibitor 99 173 IPR032675 -
Vimu3g01284 173 ProSiteProfiles Ferritin-like diiron domain profile. 1 87 IPR009040 -
Vimu3g01284 173 SUPERFAMILY Ferritin-like 4 96 IPR009078 -
Vimu3g01284 173 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 96 173 - -
Vimu3g01284 173 Pfam Ferritin-like domain 3 86 IPR008331 GO:0008199
Vimu3g01284 173 Gene3D - 1 98 IPR012347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01284 Vimu-Chr3 22845594 22846150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01284 96 173 Trihelix Transcription Factor Family AT4G18670 69.231 7.07e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01284 K00522 - gmx:547824 156.377