Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01264 ATGCTTAGGTTTTTTGTTGGGAGGATACAAAAGGGTCTTTCACTGTTTGTGGCTAGAAGGCCTGCATTCAGCTACTTGAGTGAAGATTGTGCCCCAAATGAGGCACCAGATGATGTTATGGAAGGTTATTTTGCTGTTGTTGCAATGAAGGGTAAAGAAAGACAAAGGTTCATTATTGGGTTGGATTACTTGTCTGATCCTGCATTCTTGGGACTGTTGGATCAAGCTCAAGAAGAGTATGGTTTCCGACACCAGGGAGCTCTTGCACTCCCTTGTCGACCTCAGGAGTTGCAGAAGATTCTAGATGCTCCAAAAGCATAA 321 0.4393 MLRFFVGRIQKGLSLFVARRPAFSYLSEDCAPNEAPDDVMEGYFAVVAMKGKERQRFIIGLDYLSDPAFLGLLDQAQEEYGFRHQGALALPCRPQELQKILDAPKA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01264 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 100 IPR003676 GO:0009733
Vimu3g01264 106 Pfam Auxin responsive protein 30 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01264 Vimu-Chr3 22273621 22273941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01264 30 101 Calmodulin-binding Proteins AT3G43120 45.833 1.73e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01264 - K14488 gmx:100818734 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02500 6 21753848 21754892 Vimu3g01264 3 22273621 22273941 PCT