Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01260 ATGTGTATCTGTCTGGGAAGGTTGTTGGATCCAAGTGAGGAACCCACAGGGATATTCACATTTGAGTGTCCAACTGGAATTGATTCGGATGGAATTAATCATGTCCGAGCAAACTTTATGCTTCCTCATATTGAAAAGTTAGCTGTGGAAACTAATTATGACAAATATTTTCTTCTCATTCTTGCTTCTGCGAAAAACCCAATTTCATTGTCTACAGTCAATGTAAGCACTTTGACTTCGGAGGTGGTTTCGGTTTCTAATGAATCATCTGGTGGAGAGAAATGCGTTTATGGAAAAGTATCTATGAAATTTCTTTATGAGATTTTGAATTTATCTCCAGATTCTCCTCTGCAATATCGAACTGAGATTCAATTTAGCACTGAACTTCGTTCTTGTAATTTGAAGTATTGGTTGAAACATTATACTCGAAGAACAACTAGCACCATCTCCATTAGAGATTCCAATGATTCAGAGGTAGATGTTTGTCACCAAGAATTGTCTCATTTTATTACAGGTATTACCATGACATGTTGCACAGGCTCGAAGTTACTGAGAATTTCACCTGTGCAATCTGTTTGGTACAATGTATTAACTATAAGGTTAAGACTTTTGATTACTAGTTTAAAATTACACCTAAGGTTATCGCACCAGATATTTAGGTTTGAATTTTCGGAATCAGAGGAATTTCCATCTGTATCTGTATCTGTGAAGAACGAAAACTGGTGGCGAGAGTTTATTGATCCAAAAGTTGATACTTTTATGTACTGTATCAAAAAACCAAAGAGCAGAAAGCTGAAAACTTCATCTCATGGAAGAAATGATACAGATCCGTTAGTGCTAGATGTCGAACTTATTGCTAATGCTCAGCTAATGGAGAACATGGATATTTCCCTATCAAAATTTGTTTCTGATGATGGATCAAATGCAATACAACAAGACCATCCCAAAGAGGAGCAGGTTTCGAATGCAGTATCAGATCCGTCTCAGTGTTGTGTCTCATCAGTGTCTGATGATGATGAGACATGTGGAGTGCAGGAAGTTGATCATGATGAGACACTTGGAGTGCAGGAAGTTGATAATGAAGAGATTTCAAATGCAATTGAGGTGTATACTGGTGAAGATTATATCCCTGCAATTTCTGACCATGGGGCACTTGCTGTGCTAGAAGACGATGTTTCAAATGCAACTATTTTGCATACTAACGAGGATCATGTCTCTCCAGTTTCTGATCATGATAATGGGGTAGATGTTGTGCAACAAGATGCTGTGCAACAAGATGAGGTTTCAAATGCACTAATTTTACATCCTAGTCCAGATTTTGTTCCATATGTACCCACGAATGAAGGTACAAGTTCAGTGCAACAAGCTGAGGAGAAAGAGAAGTTACTAAGTGAACGCTATGACCCAGAT 1410 0.3787 MCICLGRLLDPSEEPTGIFTFECPTGIDSDGINHVRANFMLPHIEKLAVETNYDKYFLLILASAKNPISLSTVNVSTLTSEVVSVSNESSGGEKCVYGKVSMKFLYEILNLSPDSPLQYRTEIQFSTELRSCNLKYWLKHYTRRTTSTISIRDSNDSEVDVCHQELSHFITGITMTCCTGSKLLRISPVQSVWYNVLTIRLRLLITSLKLHLRLSHQIFRFEFSESEEFPSVSVSVKNENWWREFIDPKVDTFMYCIKKPKSRKLKTSSHGRNDTDPLVLDVELIANAQLMENMDISLSKFVSDDGSNAIQQDHPKEEQVSNAVSDPSQCCVSSVSDDDETCGVQEVDHDETLGVQEVDNEEISNAIEVYTGEDYIPAISDHGALAVLEDDVSNATILHTNEDHVSPVSDHDNGVDVVQQDAVQQDEVSNALILHPSPDFVPYVPTNEGTSSVQQAEEKEKLLSERYDPD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01260 470 MobiDBLite consensus disorder prediction 454 470 - -
Vimu3g01260 470 PANTHER POLYCOMB GROUP PROTEIN 207 468 - -
Vimu3g01260 470 MobiDBLite consensus disorder prediction 444 470 - -
Vimu3g01260 470 MobiDBLite consensus disorder prediction 307 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01260 Vimu-Chr3 22102024 22112154 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01260 3 271 C2H2 Transcription Factor Family AT5G51230 23.151 2.14e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01260 - - var:108342442 535.028