Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01259 ATGGATCTTGAAGAAATGGTAAAGGATGAAGACAGTGAGGATGAAATTAATGAGGGCGCTCGAGTGATTGAAGATAGAAGAAGACTTGAGCTTCTTGGTCTTTCTGAGGATGAGAAGCAGTTCGTAACTATGTGGAACTCATTTGTTAAGAAACATCGTGTGCTGGTAGATGGCCATATGAATTGGGCATACGAAGCTTTCACAAAATATCATTGTGCTGAGTTTGTCCATTCCACCCTATTAAACTGGTCATGGAGAGTGTTTATGATAAAACTATATGATTATGGTCTTCTAAAGCCAACGACTATCGTTACATGCTATGCTATTCTCAAACAATATAGGGAACATAAATAA 354 0.3785 MDLEEMVKDEDSEDEINEGARVIEDRRRLELLGLSEDEKQFVTMWNSFVKKHRVLVDGHMNWAYEAFTKYHCAEFVHSTLLNWSWRVFMIKLYDYGLLKPTTIVTCYAILKQYREHK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01259 117 CDD VEFS-box_EMF2-like 1 113 - -
Vimu3g01259 117 PANTHER POLYCOMB GROUP PROTEIN 1 114 - -
Vimu3g01259 117 Pfam VEFS-Box of polycomb protein 1 108 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01259 Vimu-Chr3 22100695 22101612 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01259 1 110 C2H2 Transcription Factor Family AT2G35670 43.243 7.47e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01259 - - var:108342442 208.764