Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01257 ATGTGTATCTGTCTGGGAAGGTTGTTGGATCCAAGTGAGGAACCCACAGGGATATTCACATTTGAGTGTCCAACTGGAATTGATTCGGATGGAATTAATCATGTCCGAGCAAACTTTATGCTTCCTCATATTGGAAAGTTAGCTGTGGAAACTAATTATGACAAATATTTTCTTCTCATTCTTGCTTCTGCGAAAAACCCAATTTCATTGTCTACAGTCAATGTAAGCACTTTGACTTCGGAGGTGGTTTCGGTTTCTAATGAATCATCTGGTGGAGAGAAATGCGTTTATGGAAAAGTATCTCTGAAATTTCTTTATGAGATTTTGAATTTATCTCCAGATTCTCCTCTGCAATATCGAACTGAGATTCAATTTAGCACTGAACTTCGTTCTTGTAATTTGAAGTATTGGTTGAAACATTATACTCGAAGAACAACTAGCACCATCTCCATTAGAGATTCCAATGATTCAGAGGTAGATGTTTGTCACCAGGAATTGTCTCATTTTATTACAGGTATTACCATGACATGTTGCACAGGCTCGAAGTTACTGAGAATTTCACTTGTGCAATCTGTTTGGTACAATGTATTAACTATAAGGTTAAGACTTTTGATTACTAGTTTAAAATTACACCTAAGGTTATCGCACCAGATATTTAGGTTTGAATTTTCGGAATCAGAGGAATTTCCATCTGTATCTGTATCTGTGAAGAACGAAAACTGGTGGCGAGAGTTTATTGATCCAAAAGTTGATACTTTTATGTACTGTATCAAAAAACCAAAGAGCAGAAAGCTGAAAACTTCATCTCATGGAAGAAATGATACAGATCCGTTAGTGCTAGACGTCGAACTTATTGCTAATGCTCAGCTAATGGAGAACATGGATATTTCCCTATCAAAATTTGTTTCTGATGATGGATCAAATGCAATACAACAAGACCATCCCAAAGAGGTTTCAAATAATGTAATGTTACACATGGGACCATCAAATTCTAATCAGAATGACCAGACACTAACAACGGTAGAAGTTGAGCAGGAGCAGGTTTCGAATGCAGTATCAGATCCGTCTCAGTGTTGTGTCTCATCAGTGTCTGATGATGATGAGACATGTGGAGTGCAGGAAGTTGATCATGATGAGACACTTGGAGTGCAGGAAGTTGATAATGAAGAGATTTCAAATGCAATTGAGGTGTATACTGGTGAAGATTGTATCCCTGCAATTTCTGACCATGGGGCACTTGCTGTGCTAGAAGACGATGTTTCAAATGCAACTATTTTGCATACTAACGAGGATCATGTCTCTCCAGTTTCTGATCATGATAATGGGGTAGATGTTGTGCAACAAGATGCTGTGCAACAAGATGAGGTTTCAAATGCACTAATTTTACATCCTAGTCCGGATTTTATTCCATCTGTACCCACGAATGAAGGTACAAGTTCAGTGCAACAAGCTGAGGAGAAAGAGAAGTTACTAAGTGAACGCTATGACCCAGAT 1494 0.3815 MCICLGRLLDPSEEPTGIFTFECPTGIDSDGINHVRANFMLPHIGKLAVETNYDKYFLLILASAKNPISLSTVNVSTLTSEVVSVSNESSGGEKCVYGKVSLKFLYEILNLSPDSPLQYRTEIQFSTELRSCNLKYWLKHYTRRTTSTISIRDSNDSEVDVCHQELSHFITGITMTCCTGSKLLRISLVQSVWYNVLTIRLRLLITSLKLHLRLSHQIFRFEFSESEEFPSVSVSVKNENWWREFIDPKVDTFMYCIKKPKSRKLKTSSHGRNDTDPLVLDVELIANAQLMENMDISLSKFVSDDGSNAIQQDHPKEVSNNVMLHMGPSNSNQNDQTLTTVEVEQEQVSNAVSDPSQCCVSSVSDDDETCGVQEVDHDETLGVQEVDNEEISNAIEVYTGEDCIPAISDHGALAVLEDDVSNATILHTNEDHVSPVSDHDNGVDVVQQDAVQQDEVSNALILHPSPDFIPSVPTNEGTSSVQQAEEKEKLLSERYDPD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01257 498 MobiDBLite consensus disorder prediction 464 498 - -
Vimu3g01257 498 PANTHER POLYCOMB GROUP PROTEIN 207 405 - -
Vimu3g01257 498 MobiDBLite consensus disorder prediction 482 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01257 Vimu-Chr3 22074714 22084804 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01257 1 271 C2H2 Transcription Factor Family AT5G51230 23.323 1.73e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01257 - - var:108342442 542.732