Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01256 ATGGATCTTGAAGAAGTGGTAAAGGATGAAGACAGTGAGGATGAAATTAATGAGGGCGCTCGAGTGATTGAAGATAGAAGAAGACTTGAGCTTCTTGGTCTTTCTGAGGATGAGAAGCAGTTCGTAACTATGTGGAACTCATTTGTTAAGAAACATCGTGTGCTGGTAGATGGCCATATGAATTGGGCATACAAAGCTTTCACAAAATATCATTGTGCTGAGTTTGTCCATTCCACCCTATTAAACTGGTCATGGAGAGTGTTTATGATAAAACTATATAGTTATGGTCTTCTAAAGCCAACGACTATGGTTACATGCTATGCTATTCTCAAACAATATAGGGAACATAAATAA 354 0.3785 MDLEEVVKDEDSEDEINEGARVIEDRRRLELLGLSEDEKQFVTMWNSFVKKHRVLVDGHMNWAYKAFTKYHCAEFVHSTLLNWSWRVFMIKLYSYGLLKPTTMVTCYAILKQYREHK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01256 117 Pfam VEFS-Box of polycomb protein 1 108 IPR019135 -
Vimu3g01256 117 CDD VEFS-box_EMF2-like 1 113 - -
Vimu3g01256 117 PANTHER POLYCOMB GROUP PROTEIN 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01256 Vimu-Chr3 22073372 22074301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01256 1 112 C2H2 Transcription Factor Family AT5G51230 48.673 7.83e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01256 - - var:108342442 200.675