Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01254 ATGTTAGATCTTAATGAGACTCCTTCAGAAGAAATTGAAGGTGCAGCTTCTGAAAGATATTCAAGAAGGAGAAATCAACCAGACGCTGAATATATCTGGACCAATTTATCAGAAGAGCAGAAGCTTGTTGCATCAAACAGTTTCAATGTTTATTGCAAGCCTGTATTAATCTACAACGAAATCCAGTCTCGCGTACTCCTTCTACCACTTTTCATTATATTTGGAACTTTTATTTCAGAAGTTTCTCATGTCTGCCAAGATTCCTTCAGAGATGCTTGTACCACAACAGAAAGGCTAAGCACGAGAAGAGGTAAAATTATGATTCTAATGACAGTTTTGCTGTCGTGGAAAGTAGAAGAAATTCAATCTCTTTTTCCTATGTGTATCTGTCTGGGAAGGCTGTTGGATCCAAGTGAGGAACCCACAGGGGAAGAAAAGTATGAAGTTCGTCGGATATTCACATTTGAAGGACCAACTGGAATTGATTCGGATGGAATTAATCATGTCCGAGTAAACTTTATGCTTCCTCATATTGAAAAGTTAGCTGTGGAAACTAATTATGACAAATATTTTCTCCTCATTCTTGCTTCTGCGAAAAACCCAATTTCATTGTCTACAGTCAATGCAAGCACTTTGACTTCGGAGGTGGTTTCGGTTTCTAATGAATCATCTGGTGGAGAGAAATGCCTTTATGGGAAAGTATCTCTGAAATTTCTTTATGAGATTTTGAATATATCTCCAGATTCTCCTTTGCAATATCGAACTGAGATTCAATTTAGCACTGAACTTCGTTCTTGTAATTTGAAGTATTGGTTGAAACATTATACTCGAAAAACAACTAGCACCATCTCCATTAGAGATTCCAATGATTCAGAGGTAGATGTCACCAGGAATTGTCTCATTTTATTACAGGTATTACCTGACATGTTGCACAGACTCGAAGTTACTGAGAATTTCACATGTGCAATCTATTTGGTACAATGTATAAACTATAAGAGTTTAAAATTACACCTAAGGTTATCGCACCAGATATTTAGGTTTGAATTTTCGGAATCAGAGGAATTTCCATCTGTATCTGTATCTGTGAAGAAAGAAAACTGGTGGCGAGAGTTTATTGATCCAAAAGTTGATACTTTTATGTACTGTATCAAAAAACCAAAGAACAGAAAGCTGAAAACTTCATCTCATGGAAGAAATGATACAAATCCCTTAGTGTTAGACGTCGAACTTATTGCTAATGCTCAGCTAATGGAGAACATGGATATTTCCCTATCAAAATTTGTTTCTGTTGATGGATCAAATGCAATACAACAAGACCATTCCAAAGAGGTTTCAAATAATGTAATGTTACACATGGGACCATCAAATTCTAATCAGAATGGCCAGACACTAACAACGTTAAAAGTTGAGCAGAAGCAGGTTTCAAATGCAGTATCAGATCCGTCTCAGTGTTGTGTCTCATCAGTGTCTGATGATGATGAGACCTGTGGAGTATTGTATCCCTGCAATTTCTGCCATGGGGCACTTGCTGTGCTAGAAGACAATGTTTCAAATGCAACTATTTTGCATACTAACGAGGATCATGTCTCTCCAGTTTCTGATCATGATAATGGGGTAGATGCTGTGCAACAAGATGAGGTTCAAATGCACTAA 1653 0.3714 MLDLNETPSEEIEGAASERYSRRRNQPDAEYIWTNLSEEQKLVASNSFNVYCKPVLIYNEIQSRVLLLPLFIIFGTFISEVSHVCQDSFRDACTTTERLSTRRGKIMILMTVLLSWKVEEIQSLFPMCICLGRLLDPSEEPTGEEKYEVRRIFTFEGPTGIDSDGINHVRVNFMLPHIEKLAVETNYDKYFLLILASAKNPISLSTVNASTLTSEVVSVSNESSGGEKCLYGKVSLKFLYEILNISPDSPLQYRTEIQFSTELRSCNLKYWLKHYTRKTTSTISIRDSNDSEVDVTRNCLILLQVLPDMLHRLEVTENFTCAIYLVQCINYKSLKLHLRLSHQIFRFEFSESEEFPSVSVSVKKENWWREFIDPKVDTFMYCIKKPKNRKLKTSSHGRNDTNPLVLDVELIANAQLMENMDISLSKFVSVDGSNAIQQDHSKEVSNNVMLHMGPSNSNQNGQTLTTLKVEQKQVSNAVSDPSQCCVSSVSDDDETCGVLYPCNFCHGALAVLEDNVSNATILHTNEDHVSPVSDHDNGVDAVQQDEVQMH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01254 550 MobiDBLite consensus disorder prediction 1 21 - -
Vimu3g01254 550 PANTHER POLYCOMB GROUP PROTEIN 35 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01254 Vimu-Chr3 22034765 22044111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01254 50 397 C2H2 Transcription Factor Family AT5G51230 27.089 7.17e-30 122