Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01252 ATGTTAGATCTTAATGAGACTCCTTCAGAAGAAATTGAAGGTGCAGCTTCTGAAAGATATTCAAGAAGGAGAAATCAACCAGACGCTGAATATATCTGGACCAATTTATCAGAAGAGCAGAAGCTTGTTGCATCAAACAGTTTCAATGTTTATTGCAAGCCTGTATTAATCTACAACGAAATCCAGTCTCGCGTACTCCTTCTACCACTTTTCATTATATTTGGAACTTTTATTTCAGAAGTTTCTCATGTCTGCCAAGATTCCTTCAGAGATGCTTGTACCACAACAGAAAGGCTAAGCACGAGAAGAGGTAAAATTATGATTCTAATGACAGTTTTGCTGTCGTGGAAAGTAGAAGAAATTCAATCTCTTTTTCCTATGTGTATCTGTCTGGGAAGGCTGTTGGATCCAAGTGAGGAACCCACAGGGGAAGAAAAGTATGAAGTTCGTCGGATATTCACATTTGAAGGACCAACTGGAATTGATTCGGATGGAATTAATCATGTCCGAGTAAACTTTATGCTTCCTCATATTGAAAAGTTAGCTGTGGAAACTAATTATGACAAATATTTTCTCCTCATTCTTGCTTCTGCGAAAAACCCAATTTCATTGTCTACAGTCAATGCAAGCACTTTGACTTCGGAGGTGGTTTCGGTTTCTAATGAATCATCTGGTGGAGAGAAATGCCTTTATGGGAAAGTATCTCTGAAATTTCTTTATGAGATTTTGAATATATCTCCAGATTCTCCTTTGCAATATCGAACTGAGATTCAATTTAGCACTGAACTTCGTTCTTGTAATTTGAAGTATTGGTTGAAACATTATACTCGAAAAACAACTAGCACCATCTCCATTAGAGATTCCAATGATTCAGAGGTAGATGTCACCAGGAATTGTCTCATTTTATTACAGGAGGAAGGGTATTACCATGACATGTTGCACAGACTCGAAGTTACTGAGAATTTCACATGTGCAATCTGTTTGGTACAATGTATAAACTATAAGAGTTTAAAATTACACCTAAGGTTATCGCACCAGATATTTAGGTTTGAATTTTCGGAATCAGAGGAATTTCCATCTGTATCTGTATCTGTGAAGAACGAAAACTGGTGGCGAGAGTTTATTGATCCAAAAGTTGATACTTTTATGTACTGTATCAAAAAACCAAAGAGCAGAAAGCTGAAAACTTCATCTCATGGAAGATATGATACAGATTCGTTAGTGCTAGACGTCGAACTTATTGCTAATGCTCAGCTAATGGAGAACATGGATATTTCCCTATCAAAATTTGTTTCTGATGATGGATCAAATGCAATACAACAAGACCATTCCAAAGAGGTTTCAAATAATGTAATGTTACACATGGGACCATCAAATTCTAATCAGAATGACCAGACACTAACAACGTTAGAAGTTGAGCAGGAGCAGGTTTCGAATGCAGTATCAGATCCGTCTCAGTGTTATGTCTCATCAGTGTCTGATGATGATGAGACATGTGGAGTGCAGGAAGTTGATCATGATGAGACACTTGGAGTGCAGGAAGTTGATAATGAAGAGATTTCAAATGCAATTAAGGTGTATACTGGTGAAGATTGTATCCCTGCAATTTCTGACCATGGGGCACTTGCTGTGCTAGAAGACGATGTTTCAAATGCAACTATTTTGCATACTAACGAGGATCATGTCTCTCCAGTTTCTGATCATGATAATGGGGTAGATGCTATGCAACAAGATGAGGTTTCAAATGCACTAATTTTACATCCTAGTCCGGATTTTGTTCCATATGTACCCACGAATGAAGGTACAAGTTCCGTGCAACAAGCTGAGGAGAAAGAGAAGTTACTAAGTGAACGCTATGACCCAGATATGTAA 1872 0.3777 MLDLNETPSEEIEGAASERYSRRRNQPDAEYIWTNLSEEQKLVASNSFNVYCKPVLIYNEIQSRVLLLPLFIIFGTFISEVSHVCQDSFRDACTTTERLSTRRGKIMILMTVLLSWKVEEIQSLFPMCICLGRLLDPSEEPTGEEKYEVRRIFTFEGPTGIDSDGINHVRVNFMLPHIEKLAVETNYDKYFLLILASAKNPISLSTVNASTLTSEVVSVSNESSGGEKCLYGKVSLKFLYEILNISPDSPLQYRTEIQFSTELRSCNLKYWLKHYTRKTTSTISIRDSNDSEVDVTRNCLILLQEEGYYHDMLHRLEVTENFTCAICLVQCINYKSLKLHLRLSHQIFRFEFSESEEFPSVSVSVKNENWWREFIDPKVDTFMYCIKKPKSRKLKTSSHGRYDTDSLVLDVELIANAQLMENMDISLSKFVSDDGSNAIQQDHSKEVSNNVMLHMGPSNSNQNDQTLTTLEVEQEQVSNAVSDPSQCYVSSVSDDDETCGVQEVDHDETLGVQEVDNEEISNAIKVYTGEDCIPAISDHGALAVLEDDVSNATILHTNEDHVSPVSDHDNGVDAMQQDEVSNALILHPSPDFVPYVPTNEGTSSVQQAEEKEKLLSERYDPDM 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01252 623 MobiDBLite consensus disorder prediction 1 21 - -
Vimu3g01252 623 MobiDBLite consensus disorder prediction 597 623 - -
Vimu3g01252 623 PANTHER POLYCOMB GROUP PROTEIN 35 525 - -
Vimu3g01252 623 ProSitePatterns Zinc finger C2H2 type domain signature. 324 345 IPR013087 -
Vimu3g01252 623 MobiDBLite consensus disorder prediction 606 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01252 Vimu-Chr3 22007215 22016697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01252 50 400 C2H2 Transcription Factor Family AT5G51230 27.848 2.63e-33 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01252 - - vun:114192453 698.738