Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu3g01166 | ATGGGTTGGATTCCCTGTTCTGGAAGTTCAAACACTAAGAAGAAGCTAAAGAAGAAGTTAGAGAAGATGGAAGTGCAGAACAGTCTTGTTGATCCGATCAAAACCACCTCAGGTAGCGATGTTGTTGATTTTGTTGGAGTTGGATGTAAAATCAAGTCATCAATGGTTTGGGATAGCGAGACCCCTCTTACCAGATTGAGTCCTGGACGAGCCATCTTCTCAGGGAAGTTGAAGAGGAATTCATCCATGAATTCCAAAGATTCCACTAAAAATGGAAACCCGGATCACATTGCTGCACAGACATTCTCATTCCGTGAGTTGGCAACTGCTACTAGAAACTTCAGAGCTGAATGTCTTTTGGGTGAGGGAGGCTTTGGCAGAGTCTACAAGGGGCGTTTGGAAAATATTAATCAAATTGTTGCAATTAAACAACTTGACCGAAACGGACTACAAGGGAACAGAGAATTCCTTGTTGAAGTTTTGATGTTAAGTCTTCTTCACCACCCTAACCTTGTCAACCTGATTGGTTATTGTGCTGATGGGGATCAAAGGCTTCTAGTTTATGAATTTATGTCATTAGGATCATTGGAAGACCACTTACATGATATTTCTCCTGGGAAGAAACAACTTGACTGGAACACGAGGATGAAAATAGCTGCTGGGGCTGCAAGGGGATTGGAATATTTACATGACAAAGCTAATCCTCCTGTCATATACCGTGATTTAAAATGCTCCAACATTTTGCTTGGTGAAGGGTATCATCCAAAGTTATCTGATTTTGGTCTGGCTAAACTTGGCCCTGTGGGGGAAAACACCCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCACCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTTGTTCTTCTGGAAATGATTACTGGAAGGAAAGCAATTGACAATTCAAGATCTGCAGGAGAACAGAATCTTGTTGCATGGGCCAGACCCTTGTTCAAAGATCGAAGAAAATTCTCACAAATGGCTGATCCGATGCTCCAAGGTCAATACCCTTCAAGAGGGCTATACCAGGCCCTTGCTGAGCAGGCCAATATGCGTCCAGTTATAGCTGATGTTGTCACTGCTTTGAGTTACCTTGCGTCACAAAAATATGATCCCAATACACAGACTGTACAAAGCTCTCGCCTTGCTCCTGGAACTCCTCCTAGAACCAAGAGGGGATAG | 1239 | 0.4286 | MGWIPCSGSSNTKKKLKKKLEKMEVQNSLVDPIKTTSGSDVVDFVGVGCKIKSSMVWDSETPLTRLSPGRAIFSGKLKRNSSMNSKDSTKNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLENINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMSLGSLEDHLHDISPGKKQLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEMITGRKAIDNSRSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAEQANMRPVIADVVTALSYLASQKYDPNTQTVQSSRLAPGTPPRTKRG | 412 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu3g01166 | 412 | ProSiteProfiles | Protein kinase domain profile. | 114 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g01166 | 412 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 237 | 249 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu3g01166 | 412 | SMART | serkin_6 | 114 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g01166 | 412 | ProSitePatterns | Protein kinases ATP-binding region signature. | 120 | 143 | IPR017441 | GO:0005524 | |
Vimu3g01166 | 412 | CDD | STKc_IRAK | 120 | 381 | - | - | |
Vimu3g01166 | 412 | Coils | Coil | 6 | 26 | - | - | |
Vimu3g01166 | 412 | PANTHER | OS07G0668900 PROTEIN | 76 | 393 | - | - | |
Vimu3g01166 | 412 | SUPERFAMILY | Protein kinase-like (PK-like) | 100 | 393 | IPR011009 | - | |
Vimu3g01166 | 412 | Gene3D | Phosphorylase Kinase; domain 1 | 98 | 190 | - | - | |
Vimu3g01166 | 412 | FunFam | Serine/threonine-protein kinase PBS1 | 191 | 399 | - | - | |
Vimu3g01166 | 412 | Pfam | Protein kinase domain | 118 | 326 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g01166 | 412 | MobiDBLite | consensus disorder prediction | 392 | 412 | - | - | |
Vimu3g01166 | 412 | FunFam | Serine/threonine-protein kinase PBS1 | 86 | 190 | - | - | |
Vimu3g01166 | 412 | Gene3D | Transferase(Phosphotransferase) domain 1 | 191 | 402 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu3g01166 | Vimu-Chr3 | 19603619 | 19606536 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu3g01166 | 87 | 386 | Glycoside Hydrolase | AT3G07070 | 68.590 | 1.52e-157 | 449 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Vimu3g01166 | Pkinase | 2.7e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu3g01166 | - | - | gmx:100499648 | 701.049 |