Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01123 AATCAGTTCTGTCTTGTTACTGTTGCACTCCTTGCACTTTTCCGAATTCCTAGAATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCAGAACAAGAGGCACAACGGATTGTGAATGCTGCAAAAGCTGAAAAATTGGCCAGGTTGAAACAAGCCAAAGAAGAGGCTGACAAAGAGATTGCAGAATACCGAGCTCAACTGGAGCGTGAGTTTCAAAAGAAAGTTTCAGACAGTACTGGTGATTCTGGTGCTAATGTCAAGCGGCTTGAGCAAGAAACTGAAGCAAAAATTCAGAACCTGAAAACGGAGGCTGCAAAAATTTCGGATGATGTTGTCGCCATGCTTCGTACGTATGTTACAAGTGTGAAAAATTAG 387 0.4341 NQFCLVTVALLALFRIPRMASNRGQGGIQQLLAAEQEAQRIVNAAKAEKLARLKQAKEEADKEIAEYRAQLEREFQKKVSDSTGDSGANVKRLEQETEAKIQNLKTEAAKISDDVVAMLRTYVTSVKN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01123 128 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 19 128 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vimu3g01123 128 Coils Coil 28 77 - -
Vimu3g01123 128 NCBIfam V-type ATPase subunit G 24 127 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vimu3g01123 128 Gene3D - 18 128 - -
Vimu3g01123 128 Pfam Vacuolar (H+)-ATPase G subunit 25 127 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vimu3g01123 128 Coils Coil 90 114 - -
Vimu3g01123 128 FunFam V-type proton ATPase subunit G 21 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01123 Vimu-Chr3 17773321 17774666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01123 19 128 Primary Pumps ATPases(2) AT3G01390 70.909 1.03e-42 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01123 K02152 - gmx:100306550 184.882