Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu3g01096 | ATGTTGGTTGACATCAAAGCATCAAACATCTTAGTCAATGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGTTTTGCACGGTTATCTGATGATCCTACAACAACTCATATTTCAACTCAAGTAAAAGGAACAGCTGGTTACATGGATCCTGAGTATCTAAGAACATATCAACTCACTGAAAAAAGTTATGTTTATTCCTTTGGTGTTTTGCTTGTAGAAATGGTGACAGGAAGGCATCCAATTGAACCAAAGAGACCCCTTGATGAAAGAGTGACAATCAGATGGGTAAGTGTATCAGTTCTTCAAAATTTCAACTTAAAGAGTAAATTATCACATTGCTTTGGAGTAAGCAGTACCTGTTTAAACTACTTATGA | 375 | 0.3627 | MLVDIKASNILVNENLKAKVADFGFARLSDDPTTTHISTQVKGTAGYMDPEYLRTYQLTEKSYVYSFGVLLVEMVTGRHPIEPKRPLDERVTIRWVSVSVLQNFNLKSKLSHCFGVSSTCLNYL | 124 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu3g01096 | 124 | ProSiteProfiles | Protein kinase domain profile. | 1 | 124 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g01096 | 124 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 99 | IPR011009 | - | |
Vimu3g01096 | 124 | Pfam | Protein kinase domain | 3 | 89 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g01096 | 124 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 4 | 86 | - | - | |
Vimu3g01096 | 124 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 123 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu3g01096 | Vimu-Chr3 | 15501945 | 15502319 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu3g01096 | 4 | 82 | Receptor kinase-like Gene Family | AT5G49760 | 67.089 | 7.91e-32 | 116 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IV | Vimu3g01096 | Pkinase | 1.4e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu3g01096 | - | - | gmx:100811511 | 177.178 |