Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01066 ATGAAGACGATAATAGAATGCTGTGTCTCTGCAAGTGCCACACGTGTCTGTGGCCTTTTGCCATACAGAAATTATTCATGTAATAGCATGCTTGCAACTTGTTCAGCATCATCCTCAACAACAAGAAGAACTATATCTCTTTCTCTCATCTCCACCACTTTCTCTGCATTCATCTTCTCACTTTCTCCTTCTTTTTCTTCTTCTTCTTCTTCTTCAAAATTACCCTTATCAAAGTTCTTCGAGATCCCTGATTCAGGTGGAGTTAAGGCTTTGGACCTCCTTGATGGTTCAGGTGAAGTTCCCTCAGATGGGGACCAGGTTGCAATTCACTACTATGGCAGGCTGGCAGCAAAACAGGGATGGCGTTTTGACTCAACCTATGACCACAAAGATGACAATGGCGAACCCAATCCATTTGTCTTTGTCCTTGGCTCTGGCAAGGTTATAGCTGGAATTGATGTGGCAGTGAGATCGATGAAAGTAGGAGGTATTCGTAGAGTCATCATACCCCCATCACTTGGGTATCAAAACACATCACAAGAGCCAATCCCACCGAACATTAATTTGTGTCGTATTCCTCCAAAACAAAAGTTCTTTGACAGGCAGAGGTTGTTCACTACCATTTTTAATCCAACTCGCCGTGCAAATGGAGAAGGCTCCACTTTAGGAACAGTTATATTTGATATTGAGCTGGTTAGCGTGAGGCATCCATGA 714 0.4314 MKTIIECCVSASATRVCGLLPYRNYSCNSMLATCSASSSTTRRTISLSLISTTFSAFIFSLSPSFSSSSSSSKLPLSKFFEIPDSGGVKALDLLDGSGEVPSDGDQVAIHYYGRLAAKQGWRFDSTYDHKDDNGEPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNINLCRIPPKQKFFDRQRLFTTIFNPTRRANGEGSTLGTVIFDIELVSVRHP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01066 237 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 104 189 IPR001179 GO:0003755
Vimu3g01066 237 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 18 236 IPR044197 -
Vimu3g01066 237 Gene3D - 76 234 IPR046357 GO:0003755
Vimu3g01066 237 SUPERFAMILY FKBP-like 85 235 - -
Vimu3g01066 237 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 100 232 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01066 Vimu-Chr3 14771039 14773221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01066 63 189 Calmodulin-binding Proteins AT5G48570 36.719 5.98e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01066 - - gmx:100808927 331.257