Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01053 ATGGAAAGCATTTCTATATCTATTTCTAGTTTCAACTTCATTTTCATTTACATTTTGTGTGTTTGTGCATGTGCTATTATATCTGTACAGGCAGAGGAGGAAGCGCTTTTGTTGCAGCAATATATGTCTAGCGAAAATCCTCGGGAATTTGATGGTAGAGTGCGGTCCTACATTAGTCAAGTTCGAATGGAGGTTGCTCGGAAGTTTGTTCCTGTAGAAGAGTTTGAGGAGAAAGCTTTGCCTGATAAATATTTTCCAGGAAGGGAACTTCAAGCCATCAAAAATAGAACAAGATCATGCTTTCATGCTGCAGCTGCTTTTCTGGTTCAAAAAATCCTTCAGGCAAGGAAAAATCTGGTGGCCATATTTCATCCTGTTGTGGATAAACGAATAAATGAAAGGAAGGAAAAGTTCCCGGGAAAAAAGGCCAAAGATATGATGAATGCTTTGATAGATGTTGAAGATGAAAATGGAAAGAAATTGAGTGTTGATGACATCACTGATATCTTGTTGATGTACTTGAATGCTGGTCATGAATCCACAGGACATATGACCATGAAAAGGCCTCCAACGCAGAAAGGGTTGTCACTAGCAGAAGTTCGGAAGATGGAATATTTATCCAAGGAATTGCACAAGGCTAGAGAATTTCTTCCGTTTGGAGCAGGAAGCAGAATGAGCCCCGGAAATGACCTTGCCAAGCTGGAAATCTCGGTTTTCCTTCATCATTTTCTGCTGAATTACGAGTTTATCAACCTCAAAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTAGTTAGCCAGGAACCAGTTCTCTTTACCTGTATTATTAAAGTAAATATTGCCTATGGCAAGGATGATGCAACTGTTGAAGAAATCACTTATAAAGGATCCTGCCTCTGCCAAAAACAGGTATTTTCATTCTAA 930 0.3914 MESISISISSFNFIFIYILCVCACAIISVQAEEEALLLQQYMSSENPREFDGRVRSYISQVRMEVARKFVPVEEFEEKALPDKYFPGRELQAIKNRTRSCFHAAAAFLVQKILQARKNLVAIFHPVVDKRINERKEKFPGKKAKDMMNALIDVEDENGKKLSVDDITDILLMYLNAGHESTGHMTMKRPPTQKGLSLAEVRKMEYLSKELHKAREFLPFGAGSRMSPGNDLAKLEISVFLHHFLLNYEFINLKEFQLKWIRQKIGLVSQEPVLFTCIIKVNIAYGKDDATVEEITYKGSCLCQKQVFSF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01053 309 PANTHER CYTOCHROME P450 26 213 249 - -
Vimu3g01053 309 Gene3D Cytochrome P450 33 186 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01053 309 SUPERFAMILY Cytochrome P450 92 261 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01053 309 Gene3D - 251 295 IPR027417 -
Vimu3g01053 309 Pfam Cytochrome P450 101 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g01053 309 Pfam Cytochrome P450 211 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01053 Vimu-Chr3 14295014 14297655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01053 212 248 Cytochrome P450 AT1G05160 78.378 7.33e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01053 K04123 - gmx:100781238 128.642