Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01050 ATGTGGATGGAGATGTTGGAATCAGGGTACTATTGGGGAAGAGAAGCAGTGGATCCGGAGCCAGGTCGGTGCCGGAGGACGGACGGGAAGAAGTGGCGGTGCTCGAGGGAGGCGGTGGAGGGTCAGAAGTACTGCGAGCGGCACATGCATCGTGGCCGAAACCGTTCAAGAAAGCCTGTGGAACAACCTCATACATCTTCTTCTTCATCCTCGGCTTCCTTCAAACATCATCTCCTTCACCACAATCAAATTTCCTCTGGGGCCAAGAGTGACAGCAAGAGCTTGTCTGAAAACCATGATCATGTAGATGGGAATGGCAGATCTGATGGCCATGTCCTGAGGCATTTCTTGGATGATTGGCCAAGGACACTGCAAGAACAAGACCATGGTGAAAGCAATGGAAGCCAGAAAAACAACACTGGAACATATCTTTCCATGTCAACACAAGGAATCACTTCCTCGGATGTGTCACTGAGACTGTCCACTGGTCATGCAGAGAATACATGCCACGTGGCTTCAGTGGGAGGACCACTCGCAGAGGCACTGAGATCATCCACCTCCACTTCTTCACCAACCAGTGTTCTCCTACAGTTGCCAACTAGTTCTGCTTGTAACACCAGCTTCATTAGCACCTAA 636 0.5063 MWMEMLESGYYWGREAVDPEPGRCRRTDGKKWRCSREAVEGQKYCERHMHRGRNRSRKPVEQPHTSSSSSSASFKHHLLHHNQISSGAKSDSKSLSENHDHVDGNGRSDGHVLRHFLDDWPRTLQEQDHGESNGSQKNNTGTYLSMSTQGITSSDVSLRLSTGHAENTCHVASVGGPLAEALRSSTSTSSPTSVLLQLPTSSACNTSFIST 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01050 211 MobiDBLite consensus disorder prediction 61 92 - -
Vimu3g01050 211 MobiDBLite consensus disorder prediction 127 144 - -
Vimu3g01050 211 MobiDBLite consensus disorder prediction 45 112 - -
Vimu3g01050 211 Pfam WRC 19 61 IPR014977 -
Vimu3g01050 211 MobiDBLite consensus disorder prediction 93 112 - -
Vimu3g01050 211 MobiDBLite consensus disorder prediction 125 144 - -
Vimu3g01050 211 PANTHER GROWTH-REGULATING FACTOR 5 11 155 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vimu3g01050 211 ProSiteProfiles WRC domain profile. 18 62 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01050 Vimu-Chr3 14082044 14084589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01050 7 202 GRF Transcription Factor Family AT3G52910 43.145 7.56e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01050 - - vum:124840321 386.341