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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu3g01032
ATGGCTACAGCTGTTGATTTTATATTTACTAATATTGATCATTTCATGGTTACTACAGAAGAATTAAACTCAGAATTAAAGCAAGGGCAAGATGATGGATTGGATCAAATGTCAGAGCAGCAAGAGGGTGAAGAAAATCACCCGGAGGCGGGTGAGAATTTTCAAAACCTTGGAACTCTAAGTGAGAGCTTCAACTATGAAATTCCATGTATTGAAGTTGATCCAAGTAATGAAGCAGCATTTAATTATGTGACAAAGGTTTTAGATCTCTCAGGGTTCACTGGCCAGGATTCCCTAGGGATATGGTATTCTGATAACCAACCAGTTGGTCTTTCAATATATGAAGAATTGGAGGATAGCTTGCTTCTTGATCCTGATTGTTCTGGTAACAGTGGCGAAGGTGGAGAATGTAATCACCTGCTTCTGTTCGATATAGTAAATGAAGCGTTGATGGAGATTTTTGGAAGATCATACAACTATTATCCAAGACCCTTGTCTACTCTCTCCCATGTTCATCCACTGCCAACAGGAGAAAATGTGCTCTATGATGTGTGGAAGCTTATTAGCTGGTATCTGAACTCAACAATATCTGACACTTACATATCATTGGATTATTATGTGAGCAAAGATCTATCAAAATATGATGGGTGGATGAATCTTCAATTTGATTCTGAATGTGTGGGGCTTGAGCTAGATGACTTGATTTTTGATGATCTTTTGGAGGAAATAATATTCACCCAGTTTACCTAA
750
0.38
MATAVDFIFTNIDHFMVTTEELNSELKQGQDDGLDQMSEQQEGEENHPEAGENFQNLGTLSESFNYEIPCIEVDPSNEAAFNYVTKVLDLSGFTGQDSLGIWYSDNQPVGLSIYEELEDSLLLDPDCSGNSGEGGECNHLLLFDIVNEALMEIFGRSYNYYPRPLSTLSHVHPLPTGENVLYDVWKLISWYLNSTISDTYISLDYYVSKDLSKYDGWMNLQFDSECVGLELDDLIFDDLLEEIIFTQFT
249
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu3g01032
249
PANTHER
PROTEIN TRM32
27
246
IPR044257
-
Vimu3g01032
249
Pfam
Domain of unknown function (DUF4378)
81
242
IPR025486
-
Vimu3g01032
249
MobiDBLite
consensus disorder prediction
23
51
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu3g01032
Vimu-Chr3
13285249
13285998
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu3g01032
59
236
TRM (TON1 Recruiting Motif) Superfamily
AT5G02390
48.352
3.99e-54
184
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu3g01032
-
-
var:108319201
445.277
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