Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01031 ATGTGCCACAATTTCTTTCACTTTGTAGGAGTTGAAAGGCCAGGAACTTCGGATGATTCTGGACTTAACTCTACGCCACATAATTGTACGCCATGTGCAGAGTTTTCTAATTCCCCTTCTCCATCCAAAAGTTCTTCTATCAAATCCCGATTTAGGTCACTTCTCAATGAAGATATATACAAAAGGAAAGGTCGACATAAGAGAAGCTCAACTTGCCCTGCAAAGACATCACTGCAAATACCTCATGCTGATTCTGTTCACAACTTGGAGGTTGACCCACTTAGTGAATTGTTACTAACTGTTGAGAGCCCTGAACCAGTTCTAAGAACCTTTCAGAACCATCTTGCAGAAGGAACACTGGATGTGTTATCACCAGTTTTCTCTGATAAATCAATTGCCAACAATGACAAATGCGTAGCTTGTGGTACAATTTTTTCTAGTGACACTTTGGAGCAAAGCAAGATTCATAAACACTTGAGCTCTCCTATTCAAGATGGCCCGGAAGAGAAGTTGTTTAATGCCAAGATACTCACGACTGATGCTTCACCCCACCTCTTCAGGGATTTTCTTGATGCATTGGATGTGATAAACGCAAACAAGAACTTTCTATTGGAATATATACAGGATCCAGGTTCTCCTTTGCCATTTCACACTCATCGTCAACAATCTTCGAAAGCTAATATTAGACCAACCAGATCTCTTTCATTTCCTATATCTACCTCATCATCTGGAAAGCAAGATTCTGATCCAGGTCAACTCATAAACCAAATGATAGATGATCTGTTAATTGCAGAAAAAAAGAACATACAAACTCAAAGTAACATGCCAAAGCCAAATGAATCCGTACATTACTGTGTACCGTGTAGTTCTTCGCATAATTTCGATCGAGTAGGTGAAAGAGATCCTAATTCGTTACCAGTTTCACCCCAGGTTCCCAACAACGTGAGAACTAGTCACTTCAAGGATCTTAGAAATAAGATGAGGCGCTTAATTGAAGATGGAAGAAATGAAAGGCGTCGCATTACCATGGATGCCATACTTGACAAAATTCCTCGGGGAAAGAGACTTACAAAAAATATGAAGAAGTTGATTCATGACATGTCCAAAGATCCCACAGTCAATGGGGAAGGGGAAGGTGAAGAAAGTTCAACAAGTGGTTTTCAGAGCCGTCTCTCTTCTATGTCATTCAACAAGCGCCAACGGTCACCCATGAGGAATTCTTCTCTAAAAGAATCAATTGGAAGATATTCGCAGTTGTACGATACTTGTTTTAATAGTGAAGGCAAGTATGCTAGGGTTAGGGTTGAAAACTCAAGAATCAAAGAACAAGAGGTAAATTCTATATTAAAGACCCCAAAATCCTTCAAAAGGTTTCTTTCAATGCCTAATTTGAAATCTTACTTTCACCACAATGAGGAGCCTTCTTTCCTTTTATCCCCCCAAAACTCAATGAAGAGGCATGGAAATAGAAACATCAGCGCAAATGATATTGATCATGACAACAGGAGGTTTAATCATAGCGATGACTCAAAAAGTCAAATTTTTCCACCTACACTGGTTAATAACACAAATCAACAAATCAGCTTGAAATCTGACCAAAAACAACTGGTTGTCAGGAATGCTTCAAAATCAGGAATAAATTTTAGTGCTGAGGAAAAAGAAGATAACATGGGAATTGAAGGTTTAGAAAACTTGAGAGACCGTGGACAAGACATTGGAGCTGAAATAGATTACCCAGCGGAAGCAAACTCAGTCTTCTCTTCTGATACCAGCTTTCTTGACGTTTCATTTGATCTAGAAGGTATATTTTTGATCGTTTTATACTTAACGATGCATGTGCAGACCCCAATTCAAACCCTATCTGAACCCCAATTCGAACACTATCTGAAACACGAACCCCATTGTCACCGTCACCTTAAAACGGAAGGAGGACGCAAACCCTCGTGCTGCAAAGACATCACCGCCGGGGTACCCACCGTGCCGCGAAGATGGAGGTCGTGCTTGACCGCCAAAACTTGCCTCTCCTATCTCGCAAAAACGAACCTGAACCGAAAACGGAGGAGAAAAATACCTCCTCCCTTGCCGCACTACTTCTTGCGCAAGGAAGAATCCCAAAAACCTTATTTGCACTCACTCATGCTACTTTGCCTACTCTAG 2157 0.4075 MCHNFFHFVGVERPGTSDDSGLNSTPHNCTPCAEFSNSPSPSKSSSIKSRFRSLLNEDIYKRKGRHKRSSTCPAKTSLQIPHADSVHNLEVDPLSELLLTVESPEPVLRTFQNHLAEGTLDVLSPVFSDKSIANNDKCVACGTIFSSDTLEQSKIHKHLSSPIQDGPEEKLFNAKILTTDASPHLFRDFLDALDVINANKNFLLEYIQDPGSPLPFHTHRQQSSKANIRPTRSLSFPISTSSSGKQDSDPGQLINQMIDDLLIAEKKNIQTQSNMPKPNESVHYCVPCSSSHNFDRVGERDPNSLPVSPQVPNNVRTSHFKDLRNKMRRLIEDGRNERRRITMDAILDKIPRGKRLTKNMKKLIHDMSKDPTVNGEGEGEESSTSGFQSRLSSMSFNKRQRSPMRNSSLKESIGRYSQLYDTCFNSEGKYARVRVENSRIKEQEVNSILKTPKSFKRFLSMPNLKSYFHHNEEPSFLLSPQNSMKRHGNRNISANDIDHDNRRFNHSDDSKSQIFPPTLVNNTNQQISLKSDQKQLVVRNASKSGINFSAEEKEDNMGIEGLENLRDRGQDIGAEIDYPAEANSVFSSDTSFLDVSFDLEGIFLIVLYLTMHVQTPIQTLSEPQFEHYLKHEPHCHRHLKTEGGRKPSCCKDITAGVPTVPRRWRSCLTAKTCLSYLAKTNLNRKRRRKIPPPLPHYFLRKEESQKPYLHSLMLLCLL 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01031 718 MobiDBLite consensus disorder prediction 494 509 - -
Vimu3g01031 718 Pfam Protein of unknown function (DUF3741) 169 212 IPR022212 -
Vimu3g01031 718 PANTHER PROTEIN TRM32 40 582 IPR044257 -
Vimu3g01031 718 MobiDBLite consensus disorder prediction 377 410 - -
Vimu3g01031 718 MobiDBLite consensus disorder prediction 367 410 - -
Vimu3g01031 718 MobiDBLite consensus disorder prediction 217 252 - -
Vimu3g01031 718 MobiDBLite consensus disorder prediction 494 518 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01031 46 469 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.670 1.46e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01031 - - vum:124822475 1092.8