Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00990 ATGTTTGAGAAGATTCGAAGTGGTATAAGGTGTGTTGTTGTAGCCTCCTCTTTTTCCTTGAACCCTCACCTCAATCGAAGCTCGTCATTGGCTTTGATTGCAAGTGTGTTGACTTGTGTCGCAAAGGCACTCTCTGCACTCTCGTCACATAAGAACCCAAAATCCGGTGGGTTGGTTGACTATGATTATGATGAGGATGATGAAGACTACCGCCCACCACCAAGGAATAATCCAGAAGCATCTGAAGAGTATGAAGGAACAATGGAGTCTCTCAGGCTGAAAAGAAAATTGACAAAGAGGACAATCAAGAAAAAGGAGCAACATGTTTCTGGAAGCTGCTGTGAGAATAGTAGTGTATCGGCTGAGCTAAACCATTTAGAGAAAGAAACTGCTGCGTTTCGAAATTCTTCTGATAGGTTGTACGACACATCTGAAAATGGACAGTTGGATGGTGAGGAACACACTATGGTTTCACCAAAATCCCCGCCAAAGACACTAAGGTTGTACCCTGTTGCACCTTTGCTGGTACCTCGTGAGTGTAGAGAAGATGTTACTATAGATGGTTACTGTATAAAGAAAAAGTCAAGAGTGATAGTGAATGCATGGGCTTTGGGGAGAGATTCTAAAGTTTGGTTAGATAATGCTGAGGAGTTTTGTCCTGAAAGATTTTCAAATAGCAATGTGGACATAAAAGGATTTGACTTTAGACTCATACCATTTGGTTCAGGTCGCAGAGGGTGCCCTGGGATTCATTTGGGTCTCACCATTGCTAAGATTATTCTGGATCAATTGGTTCATTTCTTCAATTGGGAGCTTCCTTTGGGCATGTCCCCTGATGAATTGGACATGACTGAGAAATTTGGTCTTACAATGCCAAGAAGTAAGCATTTGCTAGCTGTGCCAACTTATCGCCTAGCAGATGAAATTGGAAAGTAA 936 0.422 MFEKIRSGIRCVVVASSFSLNPHLNRSSSLALIASVLTCVAKALSALSSHKNPKSGGLVDYDYDEDDEDYRPPPRNNPEASEEYEGTMESLRLKRKLTKRTIKKKEQHVSGSCCENSSVSAELNHLEKETAAFRNSSDRLYDTSENGQLDGEEHTMVSPKSPPKTLRLYPVAPLLVPRECREDVTIDGYCIKKKSRVIVNAWALGRDSKVWLDNAEEFCPERFSNSNVDIKGFDFRLIPFGSGRRGCPGIHLGLTIAKIILDQLVHFFNWELPLGMSPDELDMTEKFGLTMPRSKHLLAVPTYRLADEIGK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00990 311 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 240 249 IPR017972 GO:0005506|GO:0016705
Vimu3g00990 311 PANTHER CYTOCHROME P450 93A3-LIKE 164 306 - -
Vimu3g00990 311 SUPERFAMILY Cytochrome P450 165 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00990 311 Pfam Cytochrome P450 165 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00990 311 MobiDBLite consensus disorder prediction 51 89 - -
Vimu3g00990 311 Gene3D Cytochrome P450 164 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00990 Vimu-Chr3 12258051 12259529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00990 164 304 Cytochrome P450 AT2G45550 45.390 1.76e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00990 - - gmx:100798918 261.536