Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00968 ATGGAACTTTTGTTGTCGTCTTCATCATTTTCTCTCTCGAGCGCTTCTCAGCCATCCACATTTTCTTCAGAGATTCACAGGGTTCCTTCGGCCCAGATTAGGGTTCGTCGTCCATTTTTGAGCTTTTCCCCAATCATTTGGCTTCAATTTGTTCGTTTAGGAAGCTTCTATCAAGTGGCCACAAAATCAATCACACCCAACGGCATTTCGGTGGTCCTCGCCAACCCTTCCCTAGATTCTTTGTCAGATCTTCCTGACATTATTGTTCAAATAGTTGATCTCAAGCCCAACGGAAACAAATACATGTTTCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTGAGTGGAGAAAAAACTCCTGAAACCCCAACCATTGATGTGAGCTCAAAAGAATTTTATGGTGAGGGATATGATGACAGTGACAAGAGAATTCCTGACATGACCATAAGAAACAAGCAGCTTGGTTGGAATCCTAAGACTTCACTCTTCGACCTGCTGGAATCCACTCTGACCTATCAGCACAGGACATATGCTGAAGCCATCAAGAAAGGATGGCGATTTGCTATCTTGGAGAAGGGTGTCGTTGCTGTAGAAAATTCGAAACTTTGGTCTGGTATGCTTTGGGAATGGAATATTCCTCACAATGTTCTGAATGCTAGTCCCAAGGAGTTCTACAAACAAATGTTCTTCATGATGCTTAACCATATTAGAGCACCCCTCAGACACATCAAGAAAGTATTCGTGGTGTTAGACATAATTGCCCATCGTCTACCTGCTAATGACAAGAGATCATTAAAGATGAAGAAAGTTGAAGCCCTTAAGGATGTGCGTCCAGCACCTACATGA 849 0.424 MELLLSSSSFSLSSASQPSTFSSEIHRVPSAQIRVRRPFLSFSPIIWLQFVRLGSFYQVATKSITPNGISVVLANPSLDSLSDLPDIIVQIVDLKPNGNKYMFLAEIMIQVYSKVSGEKTPETPTIDVSSKEFYGEGYDDSDKRIPDMTIRNKQLGWNPKTSLFDLLESTLTYQHRTYAEAIKKGWRFAILEKGVVAVENSKLWSGMLWEWNIPHNVLNASPKEFYKQMFFMMLNHIRAPLRHIKKVFVVLDIIAHRLPANDKRSLKMKKVEALKDVRPAPT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00968 282 Gene3D - 82 183 - -
Vimu3g00968 282 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 105 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00968 Vimu-Chr3 11876983 11879728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00968 63 122 Core DNA Replication Machinery Family AT5G61000 50.820 6.14e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00968 K12449 - gmx:102667779 156.762