Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00931 TTGCAGTTTAAATTTCTTTGTAAGTTAATTCCAAGACAAATAAAGGCTGAAGAGGCTGTTAGCGTTATCAGGAAAACTGTTGAGGATCTCATTGAAAGATGTAAGGAAATTGTAGAATCTGAGGGGGAAAGAATTGATGTTGAGGAATATGTAAATGATACTGACCCTAGTATTCTTCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTCCAGTGTACAATTAAGGGATGATCTTTTGTCACTTTTAGTTGCTGGTCATGAGACCACTGGTTCAGTGCTGACCTGGACACTTTATCTTCTAAGCAAGGATTCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGCGTCCTGCCTACGAAGATATTAAAAATCTTAAGTTCTTGACACACTGTATTATTGAGTCACTCCGTCTCTATCCACATCCCCCGGTAGTGTGTATGTGGAGCTTGTTTCTGTCCAGTTCTCTCTCTCACCTACATGTGTCACGTGGACGTTTGGCTCCTTTTCTGGGCTTGATTTTTTCTGTCATTACATTGAGGAGTGGAAAGGTTAAAATTGTCTGGCTTGGGCCTTCCCAGCAGTTGGAGTTTAGCCCCAACTTAATCCAGACACAGGTGTTGATAAGAAGAGCTCAAGTTCCTGATGAGCTTCCAGGTTCTTATAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTATACAATATACATCGTTCTTCTGAGGTTTGGGATAGGGCTGAAGAGTTTATACCTGAAAGATTTGATCTGGATGGTCCGGTGCCAAATGAAACAAATACAGACTTCAGATTCATTCCATTCAGTGGAGGGCCCCGCAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTATAGTTGCTCTTGCAATCTTTATACAGCATATGAACTTCGAACTGGTTCCTAATCAGAATATCAGTATGACTACAGGAGCAACAATACACACAACAAATGTAAGGTTATCTATTCTTGTCTTTGAGATGGGTTTCTACAAGGGACTCCTTTATAAACATCCTTCAGGTTCATAA 1062 0.4068 MQFKFLCKLIPRQIKAEEAVSVIRKTVEDLIERCKEIVESEGERIDVEEYVNDTDPSILRFLLASREEVSSVQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPAYEDIKNLKFLTHCIIESLRLYPHPPVVCMWSLFLSSSLSHLHVSRGRLAPFLGLIFSVITLRSGKVKIVWLGPSQQLEFSPNLIQTQVLIRRAQVPDELPGSYKVNAGQDIMISVYNIHRSSEVWDRAEEFIPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFIQHMNFELVPNQNISMTTGATIHTTNVRLSILVFEMGFYKGLLYKHPSGS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00931 353 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 279 288 IPR017972 GO:0005506|GO:0016705
Vimu3g00931 353 Gene3D Cytochrome P450 207 335 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 PRINTS P450 superfamily signature 84 101 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 PRINTS P450 superfamily signature 277 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 PRINTS P450 superfamily signature 286 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 Pfam Cytochrome P450 14 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 Pfam Cytochrome P450 214 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 SUPERFAMILY Cytochrome P450 4 150 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 Gene3D Cytochrome P450 1 155 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 SUPERFAMILY Cytochrome P450 212 333 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 PANTHER CYTOCHROME P450 FAMILY 4 213 312 - -
Vimu3g00931 353 PRINTS E-class P450 group I signature 73 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 PRINTS E-class P450 group I signature 93 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 PRINTS E-class P450 group I signature 286 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 PRINTS E-class P450 group I signature 276 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00931 353 PRINTS E-class P450 group I signature 238 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00931 Vimu-Chr3 11269773 11274630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00931 212 329 Cytochrome P450 AT3G53130 84.746 2.52e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00931 K09837 - fve:101308016 363.614