Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00907 ATGTACAAGATTCTGATCACATTTATCAAGCAAGAATCAAACACCATGGAACTCTCTCTGTTCCACCATCAGCACCATCCTATGATGTTCCTCAATTGCCCCATTAGCTTAACAAGAACACACACAAGACTTAACAAGAAAAATTCATACAGGTTATCATGCTACTGTTCATGTTCTTCCACAAAAAACACTACAGCAGAACCAGTTACAGTGTCTTCTTTGAGTATTGAAGGAAGGAGAGCATTACTCAGTTGTCTCCTCACAACTTTTTGTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCAAAAATTCCTGAAAGTGATTATACAACCTTGCCCAATGGCTTGAAGTACTATGATTTGAAGGTCGGGAATGGAGCCGAAGCTAAAAAGGGATCTCGTGTTGCAATTCACTATGTGGCCAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGTGTTGGAGGAGGAACGGCTGACGAAAACATGCTTGAATTATTGCAGCCCTATGGATTTGATGTAGGGCAATCAGAGAGAGGAACAGTCCTTAAAGGGTTGGATTTAGGTGTAGAGGGCATGCGAGTAGGAGGCCAGCGACTACTGATTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGAGTGCAAGAAATACCTCCTAACTCAACGATTGAGTTGGACATTGAACTGCTTTCTATCAAACAAAGTCCATTTGGGACTCCTGTAAAGATAGTTGAAGGTTAA 780 0.4244 MYKILITFIKQESNTMELSLFHHQHHPMMFLNCPISLTRTHTRLNKKNSYRLSCYCSCSSTKNTTAEPVTVSSLSIEGRRALLSCLLTTFCGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTADENMLELLQPYGFDVGQSERGTVLKGLDLGVEGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00907 259 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 138 243 IPR001179 GO:0003755
Vimu3g00907 259 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 142 246 IPR001179 GO:0003755
Vimu3g00907 259 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 116 253 - -
Vimu3g00907 259 SUPERFAMILY FKBP-like 114 246 - -
Vimu3g00907 259 Gene3D - 102 250 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00907 Vimu-Chr3 11019340 11021868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00907 142 246 Calmodulin-binding Proteins AT5G48570 36.449 3.96e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00907 - - vun:114191590 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00907 3 11019340 11021868 Vimu3g00907 3 11019340 11021868 ECH