Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00864 GAGAAGCTCCACCGAATTTTGCATTTTCCTCCAAAAATGGCTTCTCAAAATCCAGCGGAAGAAGAAAACTCAAAGCAAAATTGGTCCCTCCAAGACTTTGAGATCGGTAAACCTCTCGGCAGGGGCAAATTTGGTAGAGTTTATGTTGCCAGAGAAGTCAAGAGCAATTTTGTTGTGGCGTTGAAGATTATATTTAAGGAACAAATTGATAAGTATAAAATTCATCACCAACTAAGGAGAGAGATGGAGATACAGACCAGTCTTCGGCACCCTAATATCCTGCGTCTTTATGGTTGGTTTCATGACACTGACCGTGTTTTCTTGATTCTCGAGTATGCTCATAAAGGTGAGGTCTACAAAGAGATGAGAAAGAAGGGTCACTTTACAGAGAAACAAGCTGCTACGGTAATCTATTTTCTCAAGTGTGTGCAATGTTTTGAAGATCTTTCATAA 453 0.3996 EKLHRILHFPPKMASQNPAEEENSKQNWSLQDFEIGKPLGRGKFGRVYVAREVKSNFVVALKIIFKEQIDKYKIHHQLRREMEIQTSLRHPNILRLYGWFHDTDRVFLILEYAHKGEVYKEMRKKGHFTEKQAATVIYFLKCVQCFEDLS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00864 150 Pfam Protein kinase domain 33 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu3g00864 150 ProSitePatterns Protein kinases ATP-binding region signature. 39 66 IPR017441 GO:0005524
Vimu3g00864 150 SUPERFAMILY Protein kinase-like (PK-like) 20 138 IPR011009 -
Vimu3g00864 150 FunFam Aurora kinase A 25 116 - -
Vimu3g00864 150 SMART serkin_6 33 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu3g00864 150 ProSiteProfiles Protein kinase domain profile. 33 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu3g00864 150 Gene3D Phosphorylase Kinase; domain 1 20 116 - -
Vimu3g00864 150 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 19 138 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00864 Vimu-Chr3 10249520 10250148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00864 21 133 CBL-interacting serine-threonine protein kinases AT4G18700 37.168 3.13e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Vimu3g00864 Pkinase 6.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00864 K08850 - gmx:100800111 241.121