Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00815 ATGGAACTCCAACCCTCATTGCAGTTCTTCACCAACAACGTCTATTTCTCTTCTCTTCTCCTCTCACTCACCATCCTCCTTCTTCTCATCGCCATCGCGCGTCTTTCTCACGGAAAGAACATCCTCTGCAGCTGCGAAACATGCCAGGCCTACCTCACTTCGAGCTGGTCCCAATACTTCCACAACCTCTGCGACTGGTACACCCACCTCCTCCGAACCTCCCCCACCAAAACCATCCACATCCACGTGCTGCGCAACACCATCACCGCCAACGTGGAAAACGTTGAGTACATTCTCAAGACCAGGTTCCACAACTTTCCCAAGGGGAAACCCTTCTCTACCATCCTCGGTGACTTCCTCGGCAAAGGAATCTTCAACGTCGATGGCGACACCTGGCGCTTCCAGAACAAGATGGCCGCCCTCCAACTCAACAACAACGGCGTAACCTTCTTCGCCTTCGAAATCATCAAGAGCGAAATCCATCACAGACTCCTCCCGCTCCTTCACTCGTCGACCCGAAACGGCTCCGTCTTGGACCTTCAGGACGTGTTCCGGAGATTCTCCTTCGATAGCATTTGCCGTTTCTCCTTCGGGCTGGACCCCAAGTGTTTGGAGAAGTCTTTGCCGATGTCGGAGTTCGCGGTTTGCTTTGACTTGGCGTCGAAGCTCTCTGCGGAAAGAGCCATGGCGTTGTCGCCTTATGTGTGGAAGGTGAAGAGGTTTTTCAACGTGGGGAGCGAGAAACGGCTACGGGAAGCGGTTGAAGTGATTAACAGGTTGGCCAGAGAGGTCATAAAGCAAAGGCGCGAAATGGGTTTCTCTGAAAACAAGGACTTGTTATCGCGGTTCATGAGCACGGTCCACGACGATGACACGTATTTACGAGACATTGTTGTGAGCTTCTTATTGGCGGGTCGTGACACAGTGGCTTCGGCTCTCACCAGCTTCTTTTATCTGTTGGGGAAATATCCAGAAGTTGAATCGGAGATTCGTGCGGAGGCAGATCGAGTGATTGGGCCTCATGAGGATCTCACGAGCTTTAAAGAGCTTAAGCAATTGCACTATTTGCAAGCGGCGATGCATGAAAGTCTGAGGCTGTTTCCACCGATTCAGTTTGATTCAAAGTTTTGTTTGGAGGATGATGTGTTACCCGATGGGACGAAAGTGGAGAGTGGAACTAGGGTTACTTACCATTCCTATGCGATGGGAAGGTTGGAGGAAATATGGGGCTGTGATTGTTCGGAGTTTAGGCCAGAAAGATGGTTGAAGGATGGTGTGTTCCAACCCGAAAGTCCGTTCAAGTACCCGGTTTTTCAAGCAGGGTTGAGGGTTTGTTTGGGGAAGGAAATGGCTCTAATGGAGCTCAAAACAGTGGCACTTTCACTTCTTCGGAAGTTCCACATCGAGTTGGTGGAATCATCTTGTGGAAACCCTCGTTTCTCCCCTGGACTCACTGCCACCTTTAGGTTTGGCCTTCCCGTGAAGGTTCGTGAGAGAGGATTAGAACAACAACAACAACAACTGAACCCTCTCATTCACCTATTCTCTTCCTAG 1554 0.5058 MELQPSLQFFTNNVYFSSLLLSLTILLLLIAIARLSHGKNILCSCETCQAYLTSSWSQYFHNLCDWYTHLLRTSPTKTIHIHVLRNTITANVENVEYILKTRFHNFPKGKPFSTILGDFLGKGIFNVDGDTWRFQNKMAALQLNNNGVTFFAFEIIKSEIHHRLLPLLHSSTRNGSVLDLQDVFRRFSFDSICRFSFGLDPKCLEKSLPMSEFAVCFDLASKLSAERAMALSPYVWKVKRFFNVGSEKRLREAVEVINRLAREVIKQRREMGFSENKDLLSRFMSTVHDDDTYLRDIVVSFLLAGRDTVASALTSFFYLLGKYPEVESEIRAEADRVIGPHEDLTSFKELKQLHYLQAAMHESLRLFPPIQFDSKFCLEDDVLPDGTKVESGTRVTYHSYAMGRLEEIWGCDCSEFRPERWLKDGVFQPESPFKYPVFQAGLRVCLGKEMALMELKTVALSLLRKFHIELVESSCGNPRFSPGLTATFRFGLPVKVRERGLEQQQQQLNPLIHLFSS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00815 517 Coils Coil 250 270 - -
Vimu3g00815 517 Gene3D Cytochrome P450 48 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 CDD CYP86A 75 472 - -
Vimu3g00815 517 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 Pfam Cytochrome P450 86 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 SUPERFAMILY Cytochrome P450 56 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00815 517 PANTHER CYTOCHROME P450 41 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00815 Vimu-Chr3 9470799 9472352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00815 43 499 Cytochrome P450 AT2G27690 61.987 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00815 K20624 - gmx:100784058 760.37