Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00763 ATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCTATGATGTTTGACAATGATGGCAAAATTGATGCGCAGTCAAACCAAAAGAAGGTTATGTCTGAAAACCTTGCTAATGCAATCCATGAATTTGTGAATCAGATGAGATTGAATGGGAAAGATCTGCATGAAGATGGACAATTCCTTAGCTCACGTGAACTAATGGAAGCACTTCAGGTCATAAGTTCAGATAAGCAATTGTTCCTTAAACTTCTACAAGAGCCAAATTCGCACTTGCTAAAATACATTCAGGAGTTTGAAAATGCTCAAGGGAGAGATAGCAAAGAATGCAGTTCACTTACTGCTTCCAACTGCTCTGAACTAGAACTTGTTAGTCTAAAACAAACTAGGGAGAATACCAACCGTAAGCATCTTAACTTTTTCAGGAAAATAAACTCATCTTAA 438 0.3699 MDDFCHVEAACSMMFDNDGKIDAQSNQKKVMSENLANAIHEFVNQMRLNGKDLHEDGQFLSSRELMEALQVISSDKQLFLKLLQEPNSHLLKYIQEFENAQGRDSKECSSLTASNCSELELVSLKQTRENTNRKHLNFFRKINSS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00763 145 Pfam Protein of unknown function (DUF3741) 44 88 IPR022212 -
Vimu3g00763 145 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 20 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00763 Vimu-Chr3 8490462 8493081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00763 33 86 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 38.889 8.22e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00763 - - gmx:100783243 241.891