Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00762 ATGAGCAAGTTGGGTGTGGGTGCGGACTTTCACTACTTCAAGTATATGATCGATCCCAAATTGGAGGACTCTATCTACGTCAACGGTGGACAATGGACTATGACTTTGCAAAGGAGAAAATCTGATACCAGTTGGTTGTATTCGATTAGGTCATTGGAGGCACTACACAAACTTTTTGAGCAGTTTGTTGGAGATTTTATGAGTGCACTTCATATTTGGTCATTGGAGGCACTACACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGTGCACTTCATGTTGTTCTAGCCAAAAGGTCATTGGAGGCACTACACAAACTTTTTGAGCAGTTTGTTGGAGATTTTATGAGCGCACTTCATGTTCTTCTATCCAAAAGGTCATTGGAGGCACTACACAAACTTTTTGAGCAGTTTGTTGGAGATTTTATGAGCGCACTTCATGTTCTTCTATCCAAAAGGTCATTGGAGGCACTACACTTACTTTTTGAGCAGTTTCTTGGAGATTTAATGAGGGCACTTCATGTTGTTCTAGCCAAAAGGTCATTGGAGGCACTACACAAACATTTTGAGCAGTTTCTTGGAGATTGTATGAGTGCACTTCATGTTGTTCTAGCCAAAAGGTCATTGGAGGCACTACACAAACTTTTTCAACAATTTCTTGGAGATTTTATGAGTGCACTTCATGTTCTTCTAGCCAAAAGGTCATTGGAGGCACTACACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGTGCACTTCATGTTGTTCTAGACAAAAGCAAGTTCGGTGTGGGTGCGGACTTTCACTACTTCAAGTATATGATCGATCCCAAATTGGAGGACCCTATCTACGTCAACGGTGGACAATGGACTATGGCTTTGCAAAGGAGAAAATTTGATAGCAGTTGGTTTGTATTCGGGATTATTACGTCATTGGAGGCACTACACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGTGCACTTCATGTTGTTCTAGCCAAAAGCCCTACTCTATCCGATTTAGAAATGAAGATTAGTTACTGTTATATGTTTGTTGCTGTATGTGCTTATAAGATTAAGTCATTGGAGGCACTACACAAACTTTTTGTGCAGTTTCTTGGAGCTTTTGTGAGTGCACTTCATGTTCTTCTAGCCAAAAGGTCATCGGAGGCACTACACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGTGCACTTCATGTTGTTCTAGCCAAAAGGTCATCGGAGGCACTACACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGTGCACTTCATGTTGTTCTAGCCAAAAGGTCATCGGAGGCACTACACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGTGCACTTCATGTTGTTCTAGCCAAAAGCAAGTTCGGTGGGGGTGCGGGCTTTCACTACTTCAAGTATATGATCGAGCCCAAATTGGAGGACCCTATCTACGTCATCGGTGGACAATGGACTGTGACTTTGCAAAGGAGAAAATCTGATAGCAGTTGGTTGTATTCGATTAGGTCATTGGAGGCACTACACAGACTTTTTGAGCAGTTTCTTGGAGATTTTCTAAGTGCACTTCATGTTGTTCTAGCCAAAAGGTCATTGGAGGCACTACACAAACTTTTTGAGTTGTTTCTTGGAGATTTTATGAGTGCACTTCATGTTCTTCTAGCCAAAAGGTGCTACTCGTGA 1734 0.406 MSKLGVGADFHYFKYMIDPKLEDSIYVNGGQWTMTLQRRKSDTSWLYSIRSLEALHKLFEQFVGDFMSALHIWSLEALHKLFEQFLGDFMSALHVVLAKRSLEALHKLFEQFVGDFMSALHVLLSKRSLEALHKLFEQFVGDFMSALHVLLSKRSLEALHLLFEQFLGDLMRALHVVLAKRSLEALHKHFEQFLGDCMSALHVVLAKRSLEALHKLFQQFLGDFMSALHVLLAKRSLEALHKLFEQFLGDFMSALHVVLDKSKFGVGADFHYFKYMIDPKLEDPIYVNGGQWTMALQRRKFDSSWFVFGIITSLEALHKLFEQFLGDFMSALHVVLAKSPTLSDLEMKISYCYMFVAVCAYKIKSLEALHKLFVQFLGAFVSALHVLLAKRSSEALHKLFEQFLGDFMSALHVVLAKRSSEALHKLFEQFLGDFMSALHVVLAKRSSEALHKLFEQFLGDFMSALHVVLAKSKFGGGAGFHYFKYMIEPKLEDPIYVIGGQWTVTLQRRKSDSSWLYSIRSLEALHRLFEQFLGDFLSALHVVLAKRSLEALHKLFELFLGDFMSALHVLLAKRCYS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00762 577 SUPERFAMILY eIF4e-like 460 519 IPR023398 -
Vimu3g00762 577 SUPERFAMILY eIF4e-like 2 50 IPR023398 -
Vimu3g00762 577 SUPERFAMILY eIF4e-like 250 307 IPR023398 -
Vimu3g00762 577 Gene3D RNA Cap, Translation Initiation Factor Eif4e 234 327 IPR023398 -
Vimu3g00762 577 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 250 306 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vimu3g00762 577 Pfam Eukaryotic initiation factor 4E 250 307 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vimu3g00762 577 SUPERFAMILY ARM repeat 41 548 IPR016024 -
Vimu3g00762 577 Gene3D RNA Cap, Translation Initiation Factor Eif4e 1 64 IPR023398 -
Vimu3g00762 577 Gene3D RNA Cap, Translation Initiation Factor Eif4e 442 534 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00762 Vimu-Chr3 8458638 8478667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00762 2 62 Eukaryotic Initiation Factors Gene Family AT4G18040 54.098 5.71e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00762 K03259 - gmx:100793288 79.3369