Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00761 ATGAGCAAGTTGGGTGTGGGTGCGGACTTTCACTACTTCAAGTATATGATCGATCCCAAATTGGAGGACTCTATCTACGTCAACGGTGGACAATGGACTATGACTTTGCAAAGGCGAAAATCTGATACCAGTTGGTTGTATTCGAAGAGGTCATTAGAGGCACTACACAAACTTTTTGAGCAGTTTGTTGGAGATTTTATGAGCGCACTTCATGTTCTTCTATCCAAAAGGTCATTGGAGGGACTACACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGTGCACTTCATGTTGTTCTAGCCAAAAGGTGTTGCTCGTGA 324 0.4198 MSKLGVGADFHYFKYMIDPKLEDSIYVNGGQWTMTLQRRKSDTSWLYSKRSLEALHKLFEQFVGDFMSALHVLLSKRSLEGLHKLFEQFLGDFMSALHVVLAKRCCS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00761 107 Gene3D RNA Cap, Translation Initiation Factor Eif4e 1 86 IPR023398 -
Vimu3g00761 107 Pfam Eukaryotic initiation factor 4E 2 46 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vimu3g00761 107 SUPERFAMILY eIF4e-like 2 47 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00761 Vimu-Chr3 8456764 8458358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00761 2 48 Eukaryotic Initiation Factors Gene Family AT4G18040 61.702 1.48e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00761 K03259 - gmx:100793288 78.1814