Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00760 ATGAGCAAGTTGGGTGTGGGTTCGGACTTTCAAAACTTCAAGTATATGATCGAGCCCAAATTGGAGGACTCTATCTGCGTCAACGATGGACAATGGACTACGACTTTGCAAAGGAGAAAATCTGATACCGGTTGGTTGTATTCGATTAGGTCATTGGAGGCACTACACAAAATTTTTGAGCAGTTTGTTGGAGATTTTATGAGCGCACTTCATGTTCTTCTATCCAAAAGCAAGTTGGGTGTGGGTGCGGACTTTCACTACTTCAAGTATATGATCGATCCCAAATTGGAGGACTCTATCTACGTCAACGGTGGACAATGGACTATGACTTTGCAAAGGAGAAAATCTGATACCAATTGGTTGTATTCGATTAGGTCATTGGAGGAACTACACAAATTATTTGAGCAGTTTGTTGGAGATTTTATGAGCGGACTTCATGTTCTTCTATCCAAAAGGTCATTGGAGGCACTACACAACCTTTTTGAGCAGTTTCTTGGAGATTTTATTAGCGCACTTCATATTAGGTCATTGGAGGCACTACACAAACTTTTTGAGCAGTTTGTTGGAGATTTTATGAGTGCACTTCATGTTGTTCTAGCCAAAGGGTGTTGTTCGTGA 618 0.4094 MSKLGVGSDFQNFKYMIEPKLEDSICVNDGQWTTTLQRRKSDTGWLYSIRSLEALHKIFEQFVGDFMSALHVLLSKSKLGVGADFHYFKYMIDPKLEDSIYVNGGQWTMTLQRRKSDTNWLYSIRSLEELHKLFEQFVGDFMSGLHVLLSKRSLEALHNLFEQFLGDFISALHIRSLEALHKLFEQFVGDFMSALHVVLAKGCCS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00760 205 SUPERFAMILY eIF4e-like 63 125 IPR023398 -
Vimu3g00760 205 SUPERFAMILY eIF4e-like 2 49 IPR023398 -
Vimu3g00760 205 Gene3D RNA Cap, Translation Initiation Factor Eif4e 50 156 IPR023398 -
Vimu3g00760 205 Pfam Eukaryotic initiation factor 4E 62 122 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vimu3g00760 205 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 63 126 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00760 Vimu-Chr3 8449392 8456416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00760 2 62 Eukaryotic Initiation Factors Gene Family AT4G18040 52.459 8.26e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00760 K03259 - gmx:100793288 82.8037