Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00749 ATGGGAATAGAGATTCTTGAGCCTAACACATGCATCAGGGGTTGCTGCACCAGCCCCTCTATTCCCCTTCATCTTCCTCCAGCTTCTTATACTGTCCTCTCTCCTATTGCTCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGCATGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACTTCAGAAGACATTAATAAGTTTCATAAAGAATTGCAATTGCTGTGCAAGTTAGATCACCCGGGAATAGCGACATTGATTGCGGCCCATGCAAAACCGCCCAATTACATGTTTTTCTTTAAGTTATATGAATCTCAGAATCTTTCACAGAAGTTGCATGTAGAAGAGTGGATACCAACTCTTAATGATGCACTAATGATGGCAATGCAATTAGGTATAGTTGTGATTTTGTCTATATTGATTGATAACTACTTGGCCAGGGCTTTGCAATATCTGCATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTTCTTGACAAAAGTCTTTGTCCACACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAGGGAGTTTCGATTCAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTACATACAGAAAAATCTGATGTATACAGTTTTGGGATATCAATCAACGAACTCCTCACTGGTGTTGTGCCATATACAGATCTTCGAACAGAAGCTCAATATTACAAGTTCTATAATGAGGTAAAGTATGGATGCTATATTTGTTTCTAG 837 0.3978 MGIEILEPNTCIRGCCTSPSIPLHLPPASYTVLSPIARGAESVVYEGTLDGMRVAVKKPILSTSEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESQNLSQKLHVEEWIPTLNDALMMAMQLGIVVILSILIDNYLARALQYLHNLGIVHRDVKPANILLDKSLCPHLTDFGLAEYKNDLKGVSIQNWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRTEAQYYKFYNEVKYGCYICF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00749 278 SUPERFAMILY Protein kinase-like (PK-like) 16 269 IPR011009 -
Vimu3g00749 278 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 260 - -
Vimu3g00749 278 Gene3D Transferase(Phosphotransferase) domain 1 23 273 - -
Vimu3g00749 278 Pfam Protein kinase domain 30 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu3g00749 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Vimu3g00749 278 SMART serkin_6 30 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu3g00749 278 ProSiteProfiles Protein kinase domain profile. 30 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00749 Vimu-Chr3 8281995 8284940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00749 99 264 PP2C-type Phosphatase Gene Family AT2G40860 65.663 3.28e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Vimu3g00749 Pkinase 8.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00749 - - vun:114166829 486.108