Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00748 ATGTCTTGGAGGAAATTAATGGAGATGAAGTTATTGCAGATGTTGAATAGTGATTTGGGGGAGAGGAAGAAATGGAAGAAAAAAATTGGAGAGGGAAGGTGTTATGTTGGTGATGGTGGGTGGAAGAAGAAAGGGGCTTTCTGTTGTGCTCACACAGTGCTTGAGATGAACTATACCGAACAGCAACTAACAGCAGCTGTTGTTTCTCATGAATTACGACCCGTACTTGCTACTGAGGACTTGGGTATACCATCCAGATTATTATCAATGATAAACAAATGCTGGGATGGAAATCCTAATAACAGACCCACTTTTGATGAAATAGTCAAGGAACTTGATTTGATTTTGGAGCACTGCAAATTAAAGAAGGAAGAAGATATTTATGTCAGACCTGTTAACTTGCATGTTGATCAACCTGTGGACAACACTGAACACCTTCAGGCTTATCAAGAGAGTTTTAGTTGGTCCACACGTGGTGAACATTTGACTGCCACTAGTGCAAATAATTCTGATTTGATAACTACGTGTGAGTTTTATGACAAGCCTTCTGTATACCACCCAATACTGTCTTGGGGATCTTATGCTACCTGTGGAAGAAGGGAGGCTATGGAGGATACACATTTCATTCTGCCCCGTATTTGTGATGAGAAGGATGTCTATGCTTTTGGCATCTTTGATGGCCATAGGGGTGCAGCTGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCCGTTTTGCAGACTTCAGGTTTTATGGGCAGTCCTGCTAATGCACTAGTGGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCTTATCGCAAATCCAACAGATGTATCCAGAAGGATTGGCATCCTGGGTGTACAGCCATTGCTGCTCTTATAGTCAGAAACAAGATATTTGTTGCTAACGTAGGTGATTGCAGGGCAATCATATGTCGTGCTGGTAATCCAATTTCCTTAAGTAAGGATCACGTTGCAAGCTGTCCTCAAGAGAGAGAACGTGTTATTCGTCAAGGGGGCCATGTACATTGGCAAGTTGACACTTGGAGGGTTGGTCTTCCTGCACTTCAGGTTACACGTTCTATTGGTGATGATGATCTAAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAAAATACCTTGTGCCCAGATGACGAGTTTCTGGTCATGGCTAGTGATGGGCTGTGGGATGTGATAAGCAGTACAGAGGTCATAAATATCATAAAAGATACTGTTAAGGAGCCTGGAATGTGTTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATAACAGTTATAGTTGTTTTCTTACGTCCTGTGTCCACTGCAGAGAGAATTTACTAG 1374 0.4265 MSWRKLMEMKLLQMLNSDLGERKKWKKKIGEGRCYVGDGGWKKKGAFCCAHTVLEMNYTEQQLTAAVVSHELRPVLATEDLGIPSRLLSMINKCWDGNPNNRPTFDEIVKELDLILEHCKLKKEEDIYVRPVNLHVDQPVDNTEHLQAYQESFSWSTRGEHLTATSANNSDLITTCEFYDKPSVYHPILSWGSYATCGRREAMEDTHFILPRICDEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTSGFMGSPANALVEAFIRTDAAFRKELDSYRKSNRCIQKDWHPGCTAIAALIVRNKIFVANVGDCRAIICRAGNPISLSKDHVASCPQERERVIRQGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITENTLCPDDEFLVMASDGLWDVISSTEVINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 457
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00748 457 SUPERFAMILY PP2C-like 182 449 IPR036457 -
Vimu3g00748 457 CDD PP2Cc 192 447 IPR001932 -
Vimu3g00748 457 ProSiteProfiles PPM-type phosphatase domain profile. 190 447 IPR001932 -
Vimu3g00748 457 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 181 451 - -
Vimu3g00748 457 SMART PP2C_4 180 445 IPR001932 -
Vimu3g00748 457 Gene3D - 183 452 IPR036457 -
Vimu3g00748 457 Gene3D Transferase(Phosphotransferase) domain 1 46 154 - -
Vimu3g00748 457 SUPERFAMILY Protein kinase-like (PK-like) 61 141 IPR011009 -
Vimu3g00748 457 Pfam Protein phosphatase 2C 195 440 IPR001932 -
Vimu3g00748 457 PANTHER PROTEIN PHOSPHATASE 157 445 IPR015655 GO:0004722|GO:0006470
Vimu3g00748 457 SMART PP2C_SIG_2 205 447 IPR001932 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu3g00748 Vimu-Chr3 8276569 8280017 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00748 50 457 PP2C-type Phosphatase Gene Family AT2G40860 59.854 9.09e-173 494
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00748 - - vun:114166829 800.431