Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00746 ATGAAAGAGAAAGAGTTGAGAGGAATGAGGGAAGTGAGAATTGCGTTTTTTTTTTTTTTTTTTATTATTATTATTATTATTATTATTATTAATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTCCGGAGAGGAAGACCACCCTCTACCGTCCACCATCGCCGCCGAGGATCCATGGCGGAATGCAGTGGCGGCGGGCTGCGTCTCCGTCGTTCGAATCAAATGCGTTATTGTCTTGCTTTTCTCACTCGCAGTTTTTCTATCCGCACTCTTGTGGTTACCACCATTCGTTCACTTCGCAGATCCCAAGGATCTGCATTTAAATTCTAATTACAAAGGTCATGATATCGTTGCAAGCTTTTATCTGCAGAAGCCAGTTTCTGTGGCAAAAGACAATATATTGCAGCTTTCTGATGACATTTTCGAAGAGATAGGGGTTCCCTCAACCAAAGTAACACCTTCACTGGTGGTCATCTTGTCAGTGGATCTCTTACGAAGATCAAACATGACAAAAGTCGTGTTTGCAGTTGATCCTGATGGTAAATATTCTGAAATGTCTGCAGCTGCCATTAGTTTGATAAGAGCATCATTTAAATACTTTGTTATACGCCAATCATATCTCCTGCTCACCACATCCTTATTTGGTGTACCCTCCGTTTTTGAGGTGCTGAAATTTAAGGGAGGGATCACTATCATTCCACAACAAAGTGTGTTTCCTCTGCAAACAGTGCAAACACTATTCAACTTTACTTTGAATTTCTCCATTTACGAAATACAAACAGATTTTGGTGAGCTGACTAGTCAGCTAAAGGCTGGGCTACATTTGGCTCCTTATGAGAACTTGTATGTCATCTTATCAAATTCTGAAGGTTCTACAGTAGCTGCTCCTACCACAGTTCAAACGTCTGTCCTACTTGCAGTTGGGGTGACGCCATCAAAGGAGAGGCTAAAGCAACTGGCACAAACCATAATGGGACATCATTCATGGAACCTTGGGTTGAATAACACACAATTTGGTAGGGTTAAGCAGGTTCGACTATCATCCATCTTACAACACTCCCTTCATGGCACCAGCAGTGGTGGCTCCGCTCGGTCACCTTCCCCTGCCCCTCTACCTCTCCATCACCACCATCACCATCACCACCATCACCATCACCACCATCATCATCATCACCACCATAGTCACCACCATAATGTGCATGATTTTCCTGAAACTTCACCTTCACCAATACCTACAACTGGGGAAGGTGCTGCTTCACCTGAATTTGGTTCTCCAGCCCCTGCAAGAAGTCTGCCTGCCGCAGGTAGACATTCTTATGCTAAACCTCCAAAATGTCATTCCGGGTATAGAAAGAGATCTAGCCGGAATACTCAAAAACAATTTCATCCAACACCTGCAGTTGCTCCTACTGATGCCCCACACTATCCTGTTCAATCACCAAAGGATCGACCCTCAGCACATGGTTTTCATTTCTCAGTTCCTGCCTTAAGTCCTTTACCAAACATAGCATTTGCGCATATCGCACCCTCTCCTAAGAATGAACCATCTGCTGAACATCCCAGCACACACTTTCATGGGCCATCGCCATCTTTCTGTGAGTGTTGTTAA 1683 0.4112 MKEKELRGMREVRIAFFFFFFIIIIIIIIINIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIISGEEDHPLPSTIAAEDPWRNAVAAGCVSVVRIKCVIVLLFSLAVFLSALLWLPPFVHFADPKDLHLNSNYKGHDIVASFYLQKPVSVAKDNILQLSDDIFEEIGVPSTKVTPSLVVILSVDLLRRSNMTKVVFAVDPDGKYSEMSAAAISLIRASFKYFVIRQSYLLLTTSLFGVPSVFEVLKFKGGITIIPQQSVFPLQTVQTLFNFTLNFSIYEIQTDFGELTSQLKAGLHLAPYENLYVILSNSEGSTVAAPTTVQTSVLLAVGVTPSKERLKQLAQTIMGHHSWNLGLNNTQFGRVKQVRLSSILQHSLHGTSSGGSARSPSPAPLPLHHHHHHHHHHHHHHHHHHHHSHHHNVHDFPETSPSPIPTTGEGAASPEFGSPAPARSLPAAGRHSYAKPPKCHSGYRKRSSRNTQKQFHPTPAVAPTDAPHYPVQSPKDRPSAHGFHFSVPALSPLPNIAFAHIAPSPKNEPSAEHPSTHFHGPSPSFCECC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00746 560 PANTHER F20B24.21 87 554 - -
Vimu3g00746 560 MobiDBLite consensus disorder prediction 396 422 - -
Vimu3g00746 560 MobiDBLite consensus disorder prediction 533 554 - -
Vimu3g00746 560 MobiDBLite consensus disorder prediction 468 482 - -
Vimu3g00746 560 MobiDBLite consensus disorder prediction 379 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00746 Vimu-Chr3 8263954 8271836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00746 85 544 C3H Transcription Factor Family AT3G10810 47.845 5.56e-88 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00746 - - gmx:100818532 666.381