Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00706 ATGCTTCGAAATATCCTCGGCAGCTACAAGAAGAGTTTAAATGGTTTTGTGGCAAAGCTAACAGAAGAAGAAGCAGTGAGAATGGAAGGATTGGATGATGTTGTCTCTGTTTTCCCAAACAAAAGGAATGAAGTGCAGACAACAAGGTCTTGGGATTTCGTAGGTTTATCTCAGTCTGCGAAGAGAACAAGAACAGAGAGTGACATAATTGTCGGAGTAATAGATACTGGAATTTGGCCAGAATCTCGTAGTTTTGATGATCAAGGATTTGGTCCACCTCCATCAAAATGGAAGGGCACTTGCCATAACTTTATCTGCAACAATAAAATAGTTGGAGCTAAAAATTTTGGGAAGGAGGATTCATATGGAGAAGATGACTTATCTCCAAGGGATTTAAATGGGCATGGCACTCATTGTGCATCCATTGCTGCTGGAAACCCAGTTGAGTTCGCAAGTTTCTTGGGCCTTGCGTCAGGAACAGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTGTACAAAGTTTGTTCGTCATCTGGTTCTTGTAATGATGCAGACATCCTTAAAGCATTTGTTGAAGCAATTGAAGATGGTGTTGACATCATTTCCATTTCAATTGGACCTACCGAAGTACAACACAACGACTATTTCAAAGATGTATATGCCATTGGGGCTTTCCATGCTATGAAGAAAGGCATATTAACGTCCACTTCGGCTGGTAACTTCGGTCCAGACAATTATACAATAACCAAAAATGCACCATGGGAACTTTCTGTATCAGCTAGCACTACTGACAGAAAGTTTTTAATCAGTGTTCAGTTGGGTGATGGCACAATTTATCAGGGATTTTCAGCTAATATATTTGATCCAAATTACGAGAGCTATCCATTAATTTATGCTGGAAATGCACCGAACATCATCGATAGATACAACACTTCCATATTCAGGTTATGCCAAGAAAATTCCTTAGACGAGAATTTGGTGAAAGGAAAAATGGTTTTTTGTGATGATTTCCAACGATCTTCATCAATTCTCCTTCGTCGCATAGATGGGGCTCGCATACATTCATACATAAGTCAATCAAGAAATCCCACTGTTACAATATTTAAGAGTTATCAAGATCCAGACTCAATAGCCCTTTACATAGCTCCATTCTCATCTAGAGGACCAAATAATGTCACTCGAAACATTCTTAAGCCAGATTTAGCTGCTCCAGGGGTTGACATTTTAGCTGCGAGTCCTCCATTTTCATTTGATTCTAATGTTGGAGGAGATAGAATTGCAGAGTATAATATAATGTCTGGCACTTCAATGGCATGCCCTCATGCTACTGCAGCAGCAGCTTATATCAAATCGTTTCATCCTGATTGGTCCCCTGCTGCAATCAAATCAGCACTAATGACCACTGCGACCCCAATGAGTGCATTATTCAATCCTGAAGCTGAATTTGCTTATGGTGCTGGCCAAATCAACCCTATGAAGGCACTCAATCCTGGGTTAGTTTATGATGCAAATGAAATTGATTATGTTAACTTTCTATGCGGCGAAGGATATGATACCAAAAAGCTACGAACTATTACAAAGGATGATAGCAGCTGTACACAACAACCTAATAGTGGAATGGTTTTGAATCTTAATCTCCCATCTTTTGCTCTTTCCATGTACACTTCAACACCTTTTAGTAGCACTTTTCACAGAACCGTTACCAATGTTGGAGCCAACACATCAACATACAAAGCTAGGCTAAATGTACCCCCGTCTTTGTTAAAGTTGAAAGTAGAGCCAGACGTTTTGTCCTTCTCAAATGTGGGTCAAAAGAAGTCCTTCACTCTTGTGATTGAAGGAACACTTAACGTTGATACACTTTCGTGTTCTTTGATTTGGGATGATGGAACTTTTCAAGTAAGGAGCCCTATTGTTGTGTTCCATCCATAA 1935 0.4005 MLRNILGSYKKSLNGFVAKLTEEEAVRMEGLDDVVSVFPNKRNEVQTTRSWDFVGLSQSAKRTRTESDIIVGVIDTGIWPESRSFDDQGFGPPPSKWKGTCHNFICNNKIVGAKNFGKEDSYGEDDLSPRDLNGHGTHCASIAAGNPVEFASFLGLASGTARGGVPSARIAVYKVCSSSGSCNDADILKAFVEAIEDGVDIISISIGPTEVQHNDYFKDVYAIGAFHAMKKGILTSTSAGNFGPDNYTITKNAPWELSVSASTTDRKFLISVQLGDGTIYQGFSANIFDPNYESYPLIYAGNAPNIIDRYNTSIFRLCQENSLDENLVKGKMVFCDDFQRSSSILLRRIDGARIHSYISQSRNPTVTIFKSYQDPDSIALYIAPFSSRGPNNVTRNILKPDLAAPGVDILAASPPFSFDSNVGGDRIAEYNIMSGTSMACPHATAAAAYIKSFHPDWSPAAIKSALMTTATPMSALFNPEAEFAYGAGQINPMKALNPGLVYDANEIDYVNFLCGEGYDTKKLRTITKDDSSCTQQPNSGMVLNLNLPSFALSMYTSTPFSSTFHRTVTNVGANTSTYKARLNVPPSLLKLKVEPDVLSFSNVGQKKSFTLVIEGTLNVDTLSCSLIWDDGTFQVRSPIVVFHP 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00706 644 ProSitePatterns Serine proteases, subtilase family, histidine active site. 135 145 IPR022398 -
Vimu3g00706 644 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 45 IPR037045 -
Vimu3g00706 644 CDD Peptidases_S8_3 44 471 IPR034197 -
Vimu3g00706 644 Pfam Fibronectin type-III domain 544 641 IPR041469 -
Vimu3g00706 644 CDD PA_subtilisin_like 271 368 - -
Vimu3g00706 644 Gene3D Peptidase S8/S53 domain 376 509 IPR036852 GO:0004252|GO:0006508
Vimu3g00706 644 Gene3D Peptidase S8/S53 domain 68 264 IPR036852 GO:0004252|GO:0006508
Vimu3g00706 644 ProSiteProfiles Serine proteases, subtilase domain profile. 50 496 - -
Vimu3g00706 644 Gene3D - 344 375 - -
Vimu3g00706 644 Gene3D - 265 337 - -
Vimu3g00706 644 ProSitePatterns Serine proteases, subtilase family, serine active site. 435 445 IPR023828 -
Vimu3g00706 644 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 641 IPR045051 -
Vimu3g00706 644 Gene3D - 513 642 - -
Vimu3g00706 644 Pfam Peptidase inhibitor I9 5 42 IPR010259 -
Vimu3g00706 644 SUPERFAMILY Subtilisin-like 52 500 IPR036852 GO:0004252|GO:0006508
Vimu3g00706 644 PRINTS Subtilisin serine protease family (S8) signature 66 85 IPR015500 -
Vimu3g00706 644 PRINTS Subtilisin serine protease family (S8) signature 131 144 IPR015500 -
Vimu3g00706 644 PRINTS Subtilisin serine protease family (S8) signature 434 450 IPR015500 -
Vimu3g00706 644 Pfam Subtilase family 67 488 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00706 Vimu-Chr3 7795135 7800117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00706 5 642 Subtilisin-like Serine Gene Family AT5G59100 46.746 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00706 - - vun:114190001 1022.31