Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00699 ATGCCAGGCATTCCTGTTGCCGCTCGTGCAACCTCAAGCCTCCATGATGCTTGTGAACATTTATCTGCGGAAGAGGAGCATGCAGCTGAGGAGAGTCTTTCAATTTATTGCAAGCCCGTAGAATTTTACAATATTCTCCAGCGACGTGCCATGAGAAATCCATTATTTCTTCAGAGATGTTTGCACTACCAGATAAAGGAAAAACACAAGAAAAGAATACAAATGACAGTTTCCTTGATGCGGACTATTACGGAAAGTCAAAATGTGTTTCCCATGTTTATCTGTCTCGCAAGGCGGGTTTCTGATTATGGATCTTCAAGGCAATCTGCCATGTATCGAATCGGTCGAATGTTCATCTTTCGAAACTCTCCTGGAATTGATTTAAATACTCAAGTCCAAGCAAATTTTACTCTTCCCGAAGTCAACAAGTTAGCTGATGAAGCTAGATCTTGCTCACTTGATATCTTGTTTGTCAGCACTGCCACTGTGAAAAACTCGAATTTATCATCTGGAGTCAATTCAAACTCCATGCCTTCGGATACGAATCATCTAGCTTTTTTTGAATCTGGAGAGTACTGCCTTTGGGGGAAAGTGTCTTTAGAATCACTTTATATGGCTTGGGATTGTTTTCCGAATTTTCGTTTGGGACAGCGAGCAGAGATTATGTCAACTGTTGATTTGCTTCCATGTATTCTGAAGTCAGATTTTAAAAACGACGACACAAGAGTATCTATTCAAGTTCCTTCTAATTTCGAGAATATGAGTGCATCAAAACAAGTACAAATCACAATTTCTGCGGAAGAGTTTGGGGCCAAAGAAAAATCTCCCTGTATTTCATACACAGGCAGTGAAGTACCGTCCTCATCATTGTCTCACTTGATTGGATTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTACAGAGGACAGAAGTCACCGAAGATTTCACTTGTCCATTCTGTTTGGTTAAATGTTCTAGTTTTAAGGGTCTAAGATGTCATTTGTCCTCGTCACATGATCTCTTCAACTTTGAATTTTGGGTATCGGATGAGTGTCATGCTGTAAATGTGACTGTGAAGAATGATATCTCGAGATCAGAGATTGTTGCTGATACTGTTGATCCAAGAGTGCAAACATTTTTCTATTGCGGAAAGCCCCTTAAGCGTAGGACACCAAAGGACCTATCTTCTAAAAATGCAGTAGGCTTAGAGTCTGCCTTTCCTGCAGGAGAGACTGATATTTTGGAGAAGGATGATGGAATTTCTGCCACAATTATTAGATCACATCCTGATCGAGACTCTGTCCAGTCAATATCAGACTGTGATCAATCAGTGCTACAGTTTGCCAAGACTAGGAAGTTGTCAATTGAGTGTTCTGACTCACGAAACAGTGCCCTCTTAAGGAAACGACAGTTTTTTCATTCTCACAAAGCTCAGCCAATGACAATTGAACAAGTTCTATCAGATAAAGATAGCGAAGATGAAGTTGATGATGATGTTGCTGATTTTGAAGATAGAAGGATGCTTGAAAATTTTGTTGACGTGAGCAAGGATGAGAAGAATTTCATGCACATGTGGAACTCGTTTGTTCGGAAGCATCGTGTGATTGCAGATGGTCACATTTCATGGGCATGTGAGGCTTTCTCGAAATTGCATGCAGCTGAGTTTGTTGGGTCACCCTCACTGGCAGGGTGTTGGAGAATATTTATGGTGAAATTATACAATCATGGTCTTCTAGATGCTCGAACCATGAATGACTGTAATATTATTCTTGAGCAACAGCATAAGCAGAACTCAGACCCCATTAGCTAA 1827 0.4023 MPGIPVAARATSSLHDACEHLSAEEEHAAEESLSIYCKPVEFYNILQRRAMRNPLFLQRCLHYQIKEKHKKRIQMTVSLMRTITESQNVFPMFICLARRVSDYGSSRQSAMYRIGRMFIFRNSPGIDLNTQVQANFTLPEVNKLADEARSCSLDILFVSTATVKNSNLSSGVNSNSMPSDTNHLAFFESGEYCLWGKVSLESLYMAWDCFPNFRLGQRAEIMSTVDLLPCILKSDFKNDDTRVSIQVPSNFENMSASKQVQITISAEEFGAKEKSPCISYTGSEVPSSSLSHLIGLREGNVMFNYRYYNNKLQRTEVTEDFTCPFCLVKCSSFKGLRCHLSSSHDLFNFEFWVSDECHAVNVTVKNDISRSEIVADTVDPRVQTFFYCGKPLKRRTPKDLSSKNAVGLESAFPAGETDILEKDDGISATIIRSHPDRDSVQSISDCDQSVLQFAKTRKLSIECSDSRNSALLRKRQFFHSHKAQPMTIEQVLSDKDSEDEVDDDVADFEDRRMLENFVDVSKDEKNFMHMWNSFVRKHRVIADGHISWACEAFSKLHAAEFVGSPSLAGCWRIFMVKLYNHGLLDARTMNDCNIILEQQHKQNSDPIS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00699 608 CDD VEFS-box_EMF2-like 472 599 - -
Vimu3g00699 608 CDD ZnB-Zn_EMF2-like 290 368 - -
Vimu3g00699 608 Pfam VEFS-Box of polycomb protein 459 594 IPR019135 -
Vimu3g00699 608 PANTHER POLYCOMB GROUP PROTEIN 20 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00699 Vimu-Chr3 7671675 7693950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00699 1 598 C2H2 Transcription Factor Family AT5G51230 53.628 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00699 - - gmx:100798991 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00699 3 7671675 7693950 Vimu3g00699 3 7671675 7693950 ECH