Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00698 ATGCAGCCGGTATTCCTTCGAAGATGCTTGCGCTACAAGGTACAGGAGAAGCACGATAAGAGAATACAAATGACAGTTTGCATAAAGAAGGTTACCAATAATGGGAAAAGTGTCTTTCCTATGTATGTCTGTCTGGCTAGGCGGGCTCCTAATAGTGGAATTTCAATGGATAATGTTGTTTATCAAATTGGCCGGATTTTCATCTTCCGAAATTCCCGTGAAGTTGATTTGAATTCTGAAGTCCAAGTAAAGTTTACACTCCCAGAATTGAATAAGTTAGCGAAGGAAGCTAAATCTAACACAATTGATCTCTTGTTTGTCAGCGCAGCCACTGCTGAGGACTCAAATTTATCAAATGGAGTTAATTCAAACTTGTCGCCTTTGGATCCGAATCATCTGCCTCTTGGTGAATCTGGAGAGTACTGTCTTCTGGGGCAAACACATTTAGAATCAATTTATAAGGCTTGGAATTATCTTCCTAGTTTTCGTTTGGGACACCGAACTGAGATTTTCACAACTTTGGATTTGTTTCCATGTATTCTGAAGTCGGATTTTCAAAATCAGGGTGCAAAAGTCTCCATTCAACGTCCATCTAATGGCAAAAATATGAGCATATCAGAGATACATATCTCAATTTCTGCTGAAGAGTTTGGGTCCAAGGCGAAATATTCCAGGCATTTCCTGCACCTATAG 693 0.3983 MQPVFLRRCLRYKVQEKHDKRIQMTVCIKKVTNNGKSVFPMYVCLARRAPNSGISMDNVVYQIGRIFIFRNSREVDLNSEVQVKFTLPELNKLAKEAKSNTIDLLFVSAATAEDSNLSNGVNSNLSPLDPNHLPLGESGEYCLLGQTHLESIYKAWNYLPSFRLGHRTEIFTTLDLFPCILKSDFQNQGAKVSIQRPSNGKNMSISEIHISISAEEFGSKAKYSRHFLHL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00698 230 PANTHER POLYCOMB GROUP PROTEIN 2 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00698 Vimu-Chr3 7641971 7651146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00698 3 222 C2H2 Transcription Factor Family AT5G51230 35.268 3.26e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00698 - - vra:106770142 409.068