Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00679 ATGAATGGGGAGATGAAGTTTGAGGAGGAGCAGAGAAGATACATAAAACCCTTCATAGCCACACCACCACACCTTCAAACCTTCAAACTCTCTTTACTTGACCAGCTTTTCCCAAACATCCATGGAAACATTACCTTCTTTTACCCTCACACCACCCACACACTTCCACACTTCTCCACCAAATCCCAACTCCTTCAAACCTCACTCTCCCACACCTTGACCCGCTTCTATCCTCTCGCCGGAAACCTCCATGACGCCACCACCCTCCACTGCAACGACGCCGGTGCCCTCTTCATCCAATCCCAGACCAATGTCTCTCTCTCCGACATCCTCAAAGCTCCCAGCTTCAACACCCTCCAATGTCTCCTCCCCTCCCCCGATAACCAAACCTCAACAAACGCGCCCATGCTCCTCGTACGCTTCACTTCCTTTAGCTGCGGCGGCACCGCCGTAACCATTTCTCTCTCCCACAAAATCGCCGACATGGCAGCCGTCATCGCACTCCTCAAAACCTGGACGGCTGCCTGCGCTGGAGAAACCCCTACGAGGGACCCCGAACTCGCCGCCGGCGCCGCGCTCTTTCCTCCGAGAGAGCTTCCCGCAGTGACGGTATCCGTAAACACCGTGTCGTCGGAGAATTTCACGTCGAGGAGATTCGTTTTCGAAGCGTCCAAGGTGAAAGCGCTAAAGAAGAGAATAGGAGAAGGTTGCGCGTTTGAACCTTCGAGGGTGGAGGTGGTGCTGGCGCTCATATGGAAATGCGCTCTCTCGGCTTCTCCCCCGGCAACGGCGTCGTTCAAGCAGTCGGTTTTGTTCCAAGCGGTGAACCTGCGTCCCCGGATGGAGCCAGCGGTGGCGGACGGAGCCTTGGGGAACTTTGTATGGCCATTCGCGGTGACGGTGGAGGAGGAGGAGCACTTGGAGTTGCAGGTGATGGTGAAGAGGATGAGGGAGAGTATGAAAGAGTTTTTGGAAAGTAAGGCAAAGAGGTTGAAAGAGGAAGGTGGTTTTGGAGTGTTTATGGAGAGTCTGAAGGAGAGAGATGAAGTTTTGAAGCAGAACAACGTTGTTTACAAGTGTTCGAGTTGGTGCAAGTTTCCAGTGGCTGAGGTTGATTTTGGTTGGGGCGAAGCAGTGTGGGCTTGCAGTGTGAATAAGATTGCTAGTAACAGCATTGCTTTGATGGATACAAGGGACGGTGGTGTTGAAGCTTTCGTCACCCTCGATCACCAACACATGCTTCTCTTTCAACAGCATCACCTTCTTCTAAACTATGCTTTGCTTAATCCCTCTGTTATGCTCTGA 1305 0.5264 MNGEMKFEEEQRRYIKPFIATPPHLQTFKLSLLDQLFPNIHGNITFFYPHTTHTLPHFSTKSQLLQTSLSHTLTRFYPLAGNLHDATTLHCNDAGALFIQSQTNVSLSDILKAPSFNTLQCLLPSPDNQTSTNAPMLLVRFTSFSCGGTAVTISLSHKIADMAAVIALLKTWTAACAGETPTRDPELAAGAALFPPRELPAVTVSVNTVSSENFTSRRFVFEASKVKALKKRIGEGCAFEPSRVEVVLALIWKCALSASPPATASFKQSVLFQAVNLRPRMEPAVADGALGNFVWPFAVTVEEEEHLELQVMVKRMRESMKEFLESKAKRLKEEGGFGVFMESLKERDEVLKQNNVVYKCSSWCKFPVAEVDFGWGEAVWACSVNKIASNSIALMDTRDGGVEAFVTLDHQHMLLFQQHHLLLNYALLNPSVML 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00679 434 Gene3D - 5 203 IPR023213 -
Vimu3g00679 434 Coils Coil 314 334 - -
Vimu3g00679 434 Gene3D - 211 425 IPR023213 -
Vimu3g00679 434 PANTHER F21J9.9 12 425 - -
Vimu3g00679 434 Pfam Transferase family 7 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00679 Vimu-Chr3 7387165 7388469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00679 5 418 Monolignol Biosynthesis Gene Families AT5G48930 23.725 4.62e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00679 - - gmx:100808502 597.43