Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00673 ATGGCCCCGGCAGCGCCGCCGAACCCGACACCGGAAACCACCCCGTCGGGCCACCAACTCTTCACACGGATCCGCCTGGCCACCCCCTCCGATATTCCCCACATCCACAAACTCATCCACCAAATGGCCGTCTTCGAACGCCTGACCCACCTCTTCTCCGCCACCGAGTCCTCCCTGTCCGCCACCCTCTTCTCCCCCACCGTCCAACCCTTCCACTCCTTCACCATCTTGCTTCTAGAAGCTTCCACCACCCTCTTCCCTGTTTCAACCTTTGACTCAAACCCTTTCTTCAAACCCCTGACTGAAGTCGTGAATCTGAGGCTCCCCTTTGAGGACCCCGAGCGCGAGACGTTCAAGAGCAGGGATGACGTTACTGTTGTAGGGTATGTGATGTTTTTTCCAAATTATTCAACTTTTCTGGGAAAACCAGGGTTTTACGTGGAGAACTTGTACGTGAGGGAGTGTTACAGGAGAATGGGGTTTGGGAAAATGTTCTTTTGTGCAGTAACAAAGGAAGCAGTAAAAATGAAGTACGGAAGAGTAGACTGGGTTGTGCTTGATTGGAATGTTAATGCCCTTAGGTTTTACGAAGAGATGGGTGCTGAGATTGTGGAGGAATACAAGTTTTTCAGATTGACTGGGAAGCCTCTTCAAGCTTCTGGACACACTCACTGA 675 0.5156 MAPAAPPNPTPETTPSGHQLFTRIRLATPSDIPHIHKLIHQMAVFERLTHLFSATESSLSATLFSPTVQPFHSFTILLLEASTTLFPVSTFDSNPFFKPLTEVVNLRLPFEDPERETFKSRDDVTVVGYVMFFPNYSTFLGKPGFYVENLYVRECYRRMGFGKMFFCAVTKEAVKMKYGRVDWVVLDWNVNALRFYEEMGAEIVEEYKFFRLTGKPLQASGHTH 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00673 224 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 23 214 IPR016181 -
Vimu3g00673 224 CDD NAT_SF 121 181 - -
Vimu3g00673 224 Pfam Acetyltransferase (GNAT) family 106 200 IPR000182 GO:0016747
Vimu3g00673 224 Gene3D - 22 223 - -
Vimu3g00673 224 FunFam probable acetyltransferase NATA1-like 22 223 - -
Vimu3g00673 224 PANTHER DIAMINE N-ACETYLTRANSFERASE 22 219 - -
Vimu3g00673 224 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 76 218 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00673 Vimu-Chr3 7338721 7339395 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu3g00673 Acetyltransf_1 4e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00673 K22883 - gmx:100782562 311.997