Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00665 ATGGCCGCCGCAGCGCCGCCTCCGGCCCCAACTCCGGCTCCGGAGCCCGCCACATCGTTACCAGAAACCACCCCTCTCTTCACGCGCATCCGCCTGGCCACCCTCGCCGACGTTCCCCACATCCACAAACTGATCCACCAGATGGCCGTCTTTGAACGCCTGACTCACCTCTTCTCCGCCACAGAGTCCTCCCTTGCCGCTACCCTTTTCTCCCCAACCGCCCAGCCCTTCCATTCCTTCACCCTCTTCCTTCTAGAAGCTTCTCCCAAACCCTTTGCCGTTTCAAGCGTGGACTCGAACCCGTTCTTCACACCCATCACGAAGTACGTGAATCTGAGTATCCCCATTGAGGACCCCGAGCGAGAGACGTTCAAGACGACGGATGATGTGACGGTTGTGGGGTTTGTGTTGTTCTTCCCGAACTACTCTACCTTTCTTGGGAAGCCAGGGTTTTACGTGGAGGATTTGTTCGTTAGGGAGTGTTACAGGAGAAAGGGGTTTGGGAGAATGCTTCTGTCGGCGGTGGCGAAACAGGCGGTGAAGATGGAGTACGGGAGGGTGGAGTGGGTGGTGCTCGATTGGAACGTGAATGCCATTAAGTTTTATGAAGAGATGGGTGCCGATCTCTTAAACGAGTGGAGGATTTGCAGGTTAACTGGGGAGGCCCTTCAGGCTTATGGAGGTGCCGATTAG 693 0.5628 MAAAAPPPAPTPAPEPATSLPETTPLFTRIRLATLADVPHIHKLIHQMAVFERLTHLFSATESSLAATLFSPTAQPFHSFTLFLLEASPKPFAVSSVDSNPFFTPITKYVNLSIPIEDPERETFKTTDDVTVVGFVLFFPNYSTFLGKPGFYVEDLFVRECYRRKGFGRMLLSAVAKQAVKMEYGRVEWVVLDWNVNAIKFYEEMGADLLNEWRICRLTGEALQAYGGAD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00665 230 MobiDBLite consensus disorder prediction 1 21 - -
Vimu3g00665 230 Gene3D - 28 229 - -
Vimu3g00665 230 FunFam probable acetyltransferase NATA1-like 28 229 - -
Vimu3g00665 230 Pfam Acetyltransferase (GNAT) family 119 206 IPR000182 GO:0016747
Vimu3g00665 230 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 82 221 IPR000182 GO:0016747
Vimu3g00665 230 CDD NAT_SF 128 188 - -
Vimu3g00665 230 PANTHER DIAMINE N-ACETYLTRANSFERASE 28 226 - -
Vimu3g00665 230 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 221 IPR016181 -
Vimu3g00665 230 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00665 Vimu-Chr3 7212628 7213320 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu3g00665 Acetyltransf_1 4.5e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00665 K22883 - gmx:100782562 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00665 3 7212628 7213320 Vimu3g00665 3 7212628 7213320 ECH