Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00657 ATGGTGGATGATTGGGTCAAGGCTACCACAGCTATTGCAGGTTCAGAAGGTACTCCAGATTCAGTAAATCCATCTGTTATTGATGATGAAGAAGGTCTTCCATCACCTCCTATGGATGAAGGGGCTTTATTTGCCCCTCCAACAGGTTCTATGGAACTCTCCCAGTTCTTCGATGGCATGGATGATGATGGAAGTGAGTCGACTTCACAATTTCTTAATGCTAGTCTCTACGATCCTCGACATGGTGGGGAATTCATAAAAAACCGTGATCATGGAAGAAGTCCATCTCTGAAGAGGAAACCTCAGGCATCAAATGGGGCAAACATTATTGCCAAGGACGGCGGAAAAGGTCAGCAAGCAAAGAAAAACGAGGTTGCTGTGAGGCCAAATAAACCAGCTATCAGTGATTCTGGTCCTGGCAGACCACCAAAATCAACCATGCAGAAGAAAGGCTCTATTGAGCCGAAGGTGCAGCAGAATACAGTAAAGAATACTATCCCAAAAAATCCTCATGTTCGTCAGCTAGATAAACCCAGGTGTTCGGATGATGCTTCAGTCCAAGTGAAGTTAGAAGCTAGTAAGAGGAAACTTCAGGAGCGGTATCAACAAGTTGAAAATGCTAAGAGGCAGAGGACAGTGCAGGTTATGGAGTTGCATGACCTCCCAAAGCAAGGTATTGGCCACCGGAATCCGCATGTGAAACCCGGAAATCAAAAGAGGCAATGGGGTCATGGACGAAGATAG 744 0.457 MVDDWVKATTAIAGSEGTPDSVNPSVIDDEEGLPSPPMDEGALFAPPTGSMELSQFFDGMDDDGSESTSQFLNASLYDPRHGGEFIKNRDHGRSPSLKRKPQASNGANIIAKDGGKGQQAKKNEVAVRPNKPAISDSGPGRPPKSTMQKKGSIEPKVQQNTVKNTIPKNPHVRQLDKPRCSDDASVQVKLEASKRKLQERYQQVENAKRQRTVQVMELHDLPKQGIGHRNPHVKPGNQKRQWGHGRR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00657 247 Coils Coil 187 214 - -
Vimu3g00657 247 MobiDBLite consensus disorder prediction 223 247 - -
Vimu3g00657 247 MobiDBLite consensus disorder prediction 151 168 - -
Vimu3g00657 247 MobiDBLite consensus disorder prediction 61 75 - -
Vimu3g00657 247 MobiDBLite consensus disorder prediction 170 185 - -
Vimu3g00657 247 MobiDBLite consensus disorder prediction 82 97 - -
Vimu3g00657 247 MobiDBLite consensus disorder prediction 233 247 - -
Vimu3g00657 247 MobiDBLite consensus disorder prediction 1 185 - -
Vimu3g00657 247 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 1 235 IPR044805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00657 Vimu-Chr3 7138235 7143045 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00657 - - gmx:100775579 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00657 3 7138235 7143045 Vimu3g00657 3 7138235 7143045 ECH
Vimu6g03218 6 28712444 28714925 Vimu3g00657 3 7138235 7143045 PCT