Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00651 GGGACGTGGGTATGGTTAGATATTGAAGTTCTAGCAAAAGATCCAAGAAATTTTCCTGATCCAAAGAAGTTTAAACCAGAGAGGTTTGACCCCAAATGTGAAGAAATGAAACTAAGGCATCCTTATGGAATTGGTCCTCGGGCATGTATTGGTCGGAAATTTTCCCTACAAGAGCTCAAGCTTACTCTGATTCATTTGTACCGAAAATATGTGTTTCGTCATTCCCTTAACATGGAAAAACCTGTAGAAATGGAATATGGAATGGTTCTCAACTCCAAGCATGGTGTTCCCGATCGCGGTCGAGATCTCTCCGGAGAAGGAGTTGGCGTCGAGATCGAGGAAAGTGAGGATTTTGAGGCGGTCCACGTCACTGAAGATTAA 381 0.4331 GTWVWLDIEVLAKDPRNFPDPKKFKPERFDPKCEEMKLRHPYGIGPRACIGRKFSLQELKLTLIHLYRKYVFRHSLNMEKPVEMEYGMVLNSKHGVPDRGRDLSGEGVGVEIEESEDFEAVHVTED 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00651 126 PRINTS E-class P450 group I signature 49 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00651 126 PRINTS E-class P450 group I signature 7 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00651 126 PRINTS E-class P450 group I signature 39 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00651 126 PANTHER THROMBOXANE-A SYNTHASE 1 96 - -
Vimu3g00651 126 Gene3D Cytochrome P450 1 102 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00651 126 SUPERFAMILY Cytochrome P450 1 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g00651 126 Pfam Cytochrome P450 1 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00651 Vimu-Chr3 7054799 7055690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00651 1 99 Cytochrome P450 AT2G26170 65.385 5.10e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00651 K20771 - gmx:100805689 180.644