Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00617 ATGCTTGATCTAGAAAAGGTTGTTGAAAGGTTTTGCAGGAAGGTCATTGCTTTGGACATCTACATTTGGAATTCAACATTTGGAAAAACAATGCATTCAACTGATGATTTAAAGCATTCGACTATGTCTAAACTGATTGAATTCTCTGTCTTAAAGCTCCAAGAATTTTCCAAGAAGACGGTGGTGATCTTTCTTGAGAGAGATTCAAAGAGAGGAGTCTTTTGCGCATACTCTTTGATCAACATCTGTACAAAGAAGGCTTGGCAACCTGTGAAGCGTGTTGTGATAGGCTTGGCATCCTGTGAAGAGTGTTGGTTACACGTGCAGATTGCAGAAGAGGGGATTCTTGCTGCAATTCTGCCAACCTGTTTCCTAACATGTTCGTCACGTGCCATCCTATTGGTGTCGGAATCACACTGCGACACTGCCAGTCGTGTCGCCGAACCTTCCTCTCTCTATTCTGACCCTCCCTTCCGCATCGCCGGACCTCTCGTTTCTGCGTTCTGGTTTGAGCAGAGACTCATCCGCACCGGTCCTCGCATCGATTCATTCAATGTGGAGGCTCTTGAAGTTCCCGATGCTCATAGAAGTGACTACGAGGACATAAATGTGGGTAAGAAAATTGTATTAGCTATTCAGACGCTTGGTGTTGTCTTTGGTGACGTTGGAACAAGTCCCTTGTATACCTTCAGTTATGTCCTGGTGGTTCTATGGGCCAATGATGATGGTAAAGCTGGTACGTTTGCCTTGTACTCGTTGATCTATCGTCATGCTAAGTTACCATCATATGCCTGTATATCAAGCTTTAGGCTTAAGGTGTCATCCCCTGAGCTTGAAAGGTCATTTAAAATCAAGGAAAGACTTGAGAATTCTCTGACTCTAAAGAAGATTCTACTAATATTAGTTCTTACTGGTACTTTCATGGTGATTGCTAATGGTGTTGTTACACCGGCAATGTCAGTACTGTCATCTGCTGGTGGTTTAAAAGTTGGGGTAGATGCTATCGAGAAAGATGAAGTGTTGATGATTTCAGTTGCCTGCCTTGTCATTTTGTTCAGTGTGCAAAAGTATGGAACAAGTGGGACTTGCAGTAGGACCTGCTTTGTTCTTATGGTTTTGTTCTCGTGCCTACTATTGAGTTATTTGGGTCTAGCTGCATACCTTATGGAAAACCATGTTGATGCTATTTTCCTTATTGCCAACGTGGCTACACTTATTGCTAGTCGGGCTATGACAACAGTAATAAATCTTCAGATTTGTCCAAACCCGTTCTCAACAGTTCTTCCACCTTCACATTTATGCCATTTAGTCGTGAGGGGGAGAAAGTTTAAGCTGCTGTTCGCGAAGAGAAAGGTACCATGGAAGGGGTTTTGCGATTGCGGTGGAGAAGGCGAACTACGTTTTTGCGTTGGGTGTGAAGTTGAAGGAGATTTCGTGGTGGTGTGGTTCACGTGGAGGAGGCTCGGGTTTTTGTGTTTTCTGGTTTATGTTTGCAGGTTGATGCTCGATGAGATGACAATGGAGAAGATAATTGCTTCTGTTCCTAGCGTGGTTAGTGACTGA 1563 0.4363 MLDLEKVVERFCRKVIALDIYIWNSTFGKTMHSTDDLKHSTMSKLIEFSVLKLQEFSKKTVVIFLERDSKRGVFCAYSLINICTKKAWQPVKRVVIGLASCEECWLHVQIAEEGILAAILPTCFLTCSSRAILLVSESHCDTASRVAEPSSLYSDPPFRIAGPLVSAFWFEQRLIRTGPRIDSFNVEALEVPDAHRSDYEDINVGKKIVLAIQTLGVVFGDVGTSPLYTFSYVLVVLWANDDGKAGTFALYSLIYRHAKLPSYACISSFRLKVSSPELERSFKIKERLENSLTLKKILLILVLTGTFMVIANGVVTPAMSVLSSAGGLKVGVDAIEKDEVLMISVACLVILFSVQKYGTSGTCSRTCFVLMVLFSCLLLSYLGLAAYLMENHVDAIFLIANVATLIASRAMTTVINLQICPNPFSTVLPPSHLCHLVVRGRKFKLLFAKRKVPWKGFCDCGGEGELRFCVGCEVEGDFVVVWFTWRRLGFLCFLVYVCRLMLDEMTMEKIIASVPSVVSD 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00617 520 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 206 231 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu3g00617 520 Pfam K+ potassium transporter 230 385 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00617 Vimu-Chr3 6456553 6460755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00617 368 413 Inorganic Solute Cotransporters AT5G09400 50.820 5.60e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00617 - - gmx:100788008 297.745