Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00591 ATGGACCATCTCGAGAACAAAATTAGGCGCTGGATACGAGCCACGAAAGTCTGCGTCAGGACGCTCTTTGCCAGTGAAAAGAAGCTCTGCGAGCAAATCTTCGATGGAGTTGGAACCTCTATCGATGATGCTTGCTTCGTGGAGACTGTGAAGGGCGTTGCGGTTCAACTCTTCAACTTCGCCGAGTTCATTAGTATTAATCGGAGGTCACTGGAGAAGTTGTTCAAGATTCTTGATTTGCACGATGCGTTGACGGAGTTGATGTCAGATATTGATGTTGTGTTTGATTCCAAGTCCTTCGAGACTATTAGGGTTCAGGCAGCGGAGGGTATCTATAATTCATGTAATGTAGAAGCTAAGCTTTCCATTGCCTTTTTACTTTTTTCTTCTTCATCCCTAGAATTTTCCAACTCAATGATAAGTCTATTTTTCTCTCTTCTAATAATGTTGGAGGGTATCTATTCTAAAGGTATAGTTGTTGACAATGTGAGGTATGGACCACGACTTAGAGGGAAAAAGCTAACCGATGATGAGGTGCACAAGATGCTCGCAATGGCGGACTACTTGGCGGGTTCGCTGCCATCACCTCAGGATGTGTGGTTGTGGAGCCATGGACCGCGATAG 624 0.4487 MDHLENKIRRWIRATKVCVRTLFASEKKLCEQIFDGVGTSIDDACFVETVKGVAVQLFNFAEFISINRRSLEKLFKILDLHDALTELMSDIDVVFDSKSFETIRVQAAEGIYNSCNVEAKLSIAFLLFSSSSLEFSNSMISLFFSLLIMLEGIYSKGIVVDNVRYGPRLRGKKLTDDEVHKMLAMADYLAGSLPSPQDVWLWSHGPR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00591 207 Gene3D Exocyst complex component Exo70 1 121 - -
Vimu3g00591 207 Pfam Exo70 exocyst complex subunit 10 109 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu3g00591 207 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 109 IPR004140 GO:0000145|GO:0006887
Vimu3g00591 207 SUPERFAMILY Cullin repeat-like 3 109 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00591 Vimu-Chr3 6193526 6194149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00591 4 109 EXO70 exocyst subunit family AT1G72470 71.963 2.79e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00591 K07195 - gmx:100808671 188.348