Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00545 ATGTATAGTGATGCTGAGGCCGAATCTGAATCTGAACGCAACAGAATGAGTTGTGGCGCCGATGAAGAAGAACAAGGTTCCTTCAAGAGCTTGGCCAAGCAAACGGAGCAGAGTTACCAGTTGCAGCTCGCACTTGCACTTCGTCTCTCTTCTCATGCTTCTTCTTCATCCGATCACTCTTCGTCTCCGACTCAGACATTATCACACCGTTTTTGGGTGGATGGTTGTTTGCAATACTCTGACAAAATTTTAGATGGCTTTTACTTAATCCATGGGATGGATGCATATACATGGACTCTAAGTACTGATTTGCAGAATGTTGGTATTATTCCATCATTTGAATCACTCATGTCAGTTGAACCCAGTGACGACTCGTCAATTGTTGTGGTTGCTGTTGATAAATCTAGAGATCCTGGTTTGAGAGAACTGCAAAACAGGGTAGCAAGTCTTTCAAATAACTGGATTACCACTAAAGATGCAACTGATCAGCTTGCAAGTCTTATTTGCAATAGGATGGGGGGAGGGTCTTTAACTGAGGAAAATTTAGTTATACGCTGGAAGGAATGCACCCAACTTCTTAAAAGCTGCCTGCACTCTGTCATTCTTCCAATTGGAAGCTTACCCATTGGCCTTTGTGTCCATCGAGCGTTGCTGTTTAAAGTGTTGGCTGACTTAATCAATCTACCATGCCGTATTGCAAAGGGCTGCAAGTATTGCAGAAATGACGTGGGAGCGTCATGCATAGTTCAATTTGGTTCTGACAGGTTTGTTGCATTAATTAAGTAA 786 0.4275 MYSDAEAESESERNRMSCGADEEEQGSFKSLAKQTEQSYQLQLALALRLSSHASSSSDHSSSPTQTLSHRFWVDGCLQYSDKILDGFYLIHGMDAYTWTLSTDLQNVGIIPSFESLMSVEPSDDSSIVVVAVDKSRDPGLRELQNRVASLSNNWITTKDATDQLASLICNRMGGGSLTEENLVIRWKECTQLLKSCLHSVILPIGSLPIGLCVHRALLFKVLADLINLPCRIAKGCKYCRNDVGASCIVQFGSDRFVALIK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00545 261 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 65 238 - -
Vimu3g00545 261 MobiDBLite consensus disorder prediction 1 29 - -
Vimu3g00545 261 Pfam Ethylene-responsive protein kinase Le-CTR1 64 255 - -
Vimu3g00545 261 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00545 Vimu-Chr3 5398556 5400886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00545 32 255 MAP Kinase Kinase Kinase AT5G03730 56.485 6.10e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00545 K14510 - gmx:100807496 412.92