LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu3g00536	ATGATGAGGCAATGCCTCTCAGGAATCGATACATACAACATCTTGGATCGCTATTGCAAAGCTGATTCTACTAAGAAACATGAAGGTCCATGGATTAGATCTCTGACTCAAAAGTTTGAGTCATCTCTTAATTCTCCTCTCAGAGTTAGACACAAGATGTCGAGTAATTATTGTAAATATCGTTATTTCCTTGCCACTCAATGGGCCAATGATGAGACTGTTTGCAAATCACTGCACATTCGAGAGCGTTTGAATTCTTCGGACGTTGGAGAACAGTTCATTACTTGTAACTGGTGGCGAGAATGGAGGGGATGGCGATGGGCGACTTCAAGGCGCCCCTGTCGAAGACAAAGCCCTAAGTTTCTTGGAACAAAGGGTAAATGGGAACGTTGTTGGACTGGTGATTTTGAGTATGAGATCTCTAGTAGCTTCGCCTTTCACGTAAATCTCAGTGCGAAAGGATATCGTTCTTTAATATATAGGATGTTTGGTGTTTTGTTGGCAGTTGTTCCTTTCATGTCGACTCAAACATGGATCAGAGCTCTGAACTACTCCATTGTAGAAAGGCAATATCTCATACAAAGAAAATGA	591	0.4162	MMRQCLSGIDTYNILDRYCKADSTKKHEGPWIRSLTQKFESSLNSPLRVRHKMSSNYCKYRYFLATQWANDETVCKSLHIRERLNSSDVGEQFITCNWWREWRGWRWATSRRPCRRQSPKFLGTKGKWERCWTGDFEYEISSSFAFHVNLSAKGYRSLIYRMFGVLLAVVPFMSTQTWIRALNYSIVERQYLIQRK	196

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu3g00536	196	Gene3D	alpha/beta hydrolase	3	194	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu3g00536	Vimu-Chr3	5284084	5289040	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu3g00536	38	188	Calmodulin-binding Proteins	AT2G22960	30.263	5.57e-12	60.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu3g00536	K16296		-	gmx:100780069	180.259