Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00521 ATGACAACAGTTGGATATGGAGATCTTGTGCCAGATAGCCAACTGTCAAAACTTCTTGCTTGCATTTACGTTTTTACTGGAATGACTCTTGTAGGACTAATTCTTAGCAAGACAACAGATTATATTGTTGAAAAACAGGAAATAATCCTAGTTAAAACCATATTCAAGGGTGAAAATATTGGTCTCGAACAACTTTCCATAGAGGTTGAAACCAACAAAGCTGATGTTATCTTCTACAAGGTACCCTTTGAAGAAGTTCCAGAGCTTGTGGTTGGGCGGAAGGTATTAATTAGTCAAGGATATGCATATGTTGCAATGAATCAGTATATTGATAAGAAGCACGAGTCTATTCAAAATGCAACTACCAATAAGAAAACATGTTCTGATTCTGAAGAGGAAGGAAGAGATCTTGAGAAAAATGATAGGCATCTCAGACAAGAAGAGAGGATAAAGATTGCTGAACTGAAACAGGTTTGCTCCTGTCCTGATGTTCTTGAGGTGTGGGATGCCACTGTAGCAGATCCAAAGTTATTGGTTTTCTTGAAATCTTTTCCAAATACTCTACCTGCACGTTGTGATGTTGATGTAGCCCATGCATCTCTGCCTGATCTCCTTCCAGTTGATGCAGATGCAGTCCTTGCAGTTGATGCAGTTGTTGTTGCAGATGCATACCTTGTGTCCTATGAAAGGAGTAAGGTAGTTACATAA 708 0.3898 MTTVGYGDLVPDSQLSKLLACIYVFTGMTLVGLILSKTTDYIVEKQEIILVKTIFKGENIGLEQLSIEVETNKADVIFYKVPFEEVPELVVGRKVLISQGYAYVAMNQYIDKKHESIQNATTNKKTCSDSEEEGRDLEKNDRHLRQEERIKIAELKQVCSCPDVLEVWDATVADPKLLVFLKSFPNTLPARCDVDVAHASLPDLLPVDADAVLAVDAVVVADAYLVSYERSKVVT 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00521 235 Gene3D - 1 39 - -
Vimu3g00521 235 MobiDBLite consensus disorder prediction 126 140 - -
Vimu3g00521 235 MobiDBLite consensus disorder prediction 120 140 - -
Vimu3g00521 235 SUPERFAMILY Voltage-gated potassium channels 1 49 - -
Vimu3g00521 235 PANTHER SPLICING FACTOR 3B 112 189 - -
Vimu3g00521 235 Gene3D - 40 142 - -
Vimu3g00521 235 Pfam Ion channel 1 43 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00521 Vimu-Chr3 5109715 5113921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00521 1 97 Ion Channels AT5G55630 46.392 2.93e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00521 K05389 K12829 gmx:100799492 126.716