Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00511 ATGGTGCAGTTGAGGAATAGGGATGCTGCTGTGAGATCTAGGGAGAGGAAGAAGGCTTATTTGAAAGACCTGGAGATGAAGAGTAGGTATTTAGAAGGGGAATGCAGAAGACTGGGGCATTTGCTTCAGTTCTGCTATGCTGAGAACAATGCTTTGCGGCTTTGCTTGCAATCGCGTGGTGCATATGGTGTTTCTGTGACCTCGCAGGAGTCTGCTGTGCTCTTGTTGGGTAAGGCTTGCTATGCCAAGTCAAATTACCATTCTTCTATTGCCATTGCTGTTTTGTTTTGGGCATTCATCTGGGTGACACTAGCAATTTTGCTTGATTATTTTGGTTTCATGATATGA 348 0.4454 MVQLRNRDAAVRSRERKKAYLKDLEMKSRYLEGECRRLGHLLQFCYAENNALRLCLQSRGAYGVSVTSQESAVLLLGKACYAKSNYHSSIAIAVLFWAFIWVTLAILLDYFGFMI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00511 115 CDD bZIP_HY5-like 4 49 - -
Vimu3g00511 115 Gene3D - 2 58 - -
Vimu3g00511 115 Pfam bZIP transcription factor 4 38 IPR004827 GO:0003700|GO:0006355
Vimu3g00511 115 SUPERFAMILY Leucine zipper domain 3 55 IPR046347 GO:0003700|GO:0006355
Vimu3g00511 115 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 3 81 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g00511 11 73 bZIP Transcription Factor Family AT1G42990 57.812 6.51e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu3g00511 bZIP_1 2.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00511 - - vum:124842973 145.206